Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq44 228 7e-55 seq36 105 5e-18 seq158 95.1 1e-14 >seq44 Length=1464967 Score = 228 bits (252), Expect = 7e-55 Identities = 775/1194 (65%), Gaps = 25/1194 (2%) Strand=Plus/Minus Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888 || ||||| || ||||| | ||| || |||||||||||||||||||| || || | ||| Sbjct 1427583 ATGTTCATTGCGTTAAGAATATCACCGTTGTCAGCGTCTATTTCCCAAGCGAAAAGACCG 1427524 Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAA-TCAACACTATCATA 95947 |||| ||||| | ||||||| ||||| | || || || || | | ||| || Sbjct 1427523 CCTAGTTTGTTATTCCTCACATATTTGCCTTTCTCGATGACTGACCTCGAATC-ATCGTA 1427465 Query 95948 TGAAATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCAAA 96007 | || | || ||| ||| || || ||||| | |||| ||||| ||||| | Sbjct 1427464 GGTAACAAGGTCTCCTGTGGAAGGATTGAAGACGTATGGAGCTTGGGCTACTTTGTCGTA 1427405 Query 96008 TTTAACAATATATT------TGTTTATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061 | | | | | || ||| | || || | | || || || || || Sbjct 1427404 GTGATAGGTCCACTGACCACTGGCAATTCCATTGGCAATCTCCCTGTAGTCGACCACTCC 1427345 Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTA-CTACTTCCCAAAAAATAGTTATCGTTTT 96120 || | |||||| || ||| || || | | ||||| || || | |||||| | Sbjct 1427344 GTCCTGCCAAGTACCTTTAACAGGGCCATCAGCTACT-CCTGTGAAGGGGATATCGTCCT 1427286 Query 96121 CGTAATTTGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGC 96180 ||| | ||||||||||| || ||||||||||| || || || || | | || Sbjct 1427285 TGTAGTCATGGACTCCAGTCCATCCACGACCGTACATAGCAACACCGACGACCAGCTTCT 1427226 Query 96181 GCGGGTCCACGCCTTGATTTGTGAGCAATTTAACGGCATGGTCCGTGTTGTACAGCTCGT 96240 || | ||| || ||| || | ||| || ||| || |||| ||| | Sbjct 1427225 TGGGCTGCACTCCCTGAGCCAAAAGATACCTAATACCAAAGTCAGTAGTGTAAGTCTCCT 1427166 Query 96241 TTGGGTTCCAACTC-GGCGCGTACAGTGTAGTTTGGTATCCCAAA---TCAATGTTTGAC 96296 | || ||||| ||| || ||||| | | || |||| || | | ||| || ||| Sbjct 1427165 TGGGTTTCCA-CTCAGGAGCGTATAACGAGGTCTGGTGGCCAAGAGTGTCATTG---GAC 1427110 Query 96297 CACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACG 96356 || || || || || ||||||||||| | || || | ||| | | | || || || | Sbjct 1427109 CAGGCTCCCTTGAAGTCGTAGCTCATCACGAAAATATGGTCCATGTAGTTCTGGGCTTCC 1427050 Query 96357 TCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTAC 96416 | ||| || || || ||| ||||| || |||||||| ||| |||| |||||| Sbjct 1427049 TTGTAGTTGACAACCTGAATCTTGTCCCACCCAGCACTGATGGCAGAAGTCAGCTCGTAT 1426990 Query 96417 GTTTTGCCCGTTTGCAGTTGC-AACTCGTCTAACATCACGCGCAATTCCTTTAATAGAAT 96475 | || || || | ||| | |||||||| ||||| | | ||||| | || | Sbjct 1426989 TTCTTTCCGGTCT-CAGCGGATAACTCGTCCAACATGTGTCTAAGCTCCTTCATGAGTGT 1426931 Query 96476 GTTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTACCGC 96534 ||| | ||| | || | | | | | ||| ||||| || || ||||| | Sbjct 1426930 CACGTATATTTCACCATC----TTTAGGACCACCAAGGTCAGGGTTAGCTCCCTTACCTC 1426875 Query 96535 CCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCTC 96594 | || || ||||| || || || || || ||||| |||||||| ||| ||||| || Sbjct 1426874 CAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTCCAGGTCTGTAAAAAGTCCT 1426815 Query 96595 TGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATAGAACGGGTCGG 96654 |||| || | || || | | || | ||| | | | | |||| || || | Sbjct 1426814 TGACTGAACCAACGAAGCGGTCTCTCTTAACTTTGTCATCGAAGAAGAAGAAGGGATCAG 1426755 Query 96655 ACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTTTGGCCG 96714 ||| ||||| || |||| || || ||||| || |||| || || ||| |||| | Sbjct 1426754 CCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAGGTCAGGTTTGGCCTGTTTCAACA 1426695 Query 96715 CCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCTTTTGCG 96774 ||||| ||||| || ||||| ||||| ||||| ||||| | || | |||||| || | Sbjct 1426694 TCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATTCCAGGACGATAAGCCCTTCTGTG 1426635 Query 96775 GTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGCCCTGGC 96834 | ||||| | || |||||||| ||||| || | ||||| || ||| || || || Sbjct 1426634 GCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATACTTTGAAGTCTTCCCGACCGCTGC 1426575 Query 96835 AAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATCGTTAAGGCCGT 96894 | ||||||||||| |||| |||||||| || || | ||||||| ||| | Sbjct 1426574 AGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTCCTTCAAACTGTCGTTAATGCCAT 1426515 Query 96895 CGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCAGCGGCACTT 96954 | ||||| ||||| || || || |||||||| || || | || |||||| | || |||| Sbjct 1426514 CACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTGGGTCAGGTTGGGAACGGGAACTT 1426455 Query 96955 TGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGCAGCGA 97008 |||| || || || || || |||||||||||||| || || |||||| ||| Sbjct 1426454 TGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTCTACGAAGTACGCACCGA 1426401 >seq36 Length=1647457 Score = 105 bits (116), Expect = 5e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| ||||| ||||| |||||||| |||||||| || | | ||| | | ||| Sbjct 455585 AGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCC 455526 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | |||||||| ||| | || | ||||| ||||| || | ||| |||||||| Sbjct 455525 TCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 455466 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| ||| || | | | |||||| ||||| || | |||||||| Sbjct 455465 TGGATCTTTGC--CTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGG 455408 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || ||||||||||| |||||||| Sbjct 455407 TTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 102 bits (112), Expect = 7e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || ||||| | |||||| |||||||| || || |||||||| || | | Sbjct 937291 CCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGAC 937350 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | ||||| || ||| | ||||| ||||| || || ||| Sbjct 937351 AGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGA 937410 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCG--GGCTCCG 16886 | ||| || || || |||| |||| | | | || | ||| ||| || ||| Sbjct 937411 ATGCCTTCCTTATCCTGGATTTTA-GCTTTAACATTCTCA-ATTGTGTCCGATGGTTCCA 937468 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 937469 CTTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | ||||| || || |||||||| || |||||||||| | || | ||||| Sbjct 935551 AGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCGTCC 935610 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | ||||| ||||| || ||| ||| | ||| || ||||| Sbjct 935611 TCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 935670 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| ||| || | | | ||||| |||||| ||| | ||||| ||| Sbjct 935671 TGAATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGATCGTT 935730 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||||||||| || || || || ||||| Sbjct 935731 TTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||||| | ||| | | ||| Sbjct 455357 AGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCC 455298 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | |||||||| || | || | ||||||||||| || | ||| |||||||| Sbjct 455297 TCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCT 455238 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | |||||| ||||| || | |||||| | Sbjct 455237 TGGATCTTGGC--CTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTG 455180 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || |||||||| |||||||| Sbjct 455179 TTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 >seq158 Length=707457 Score = 95.1 bits (104), Expect = 1e-14 Identities = 169/242 (70%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 16702 CATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTA 16761 |||||||| ||||| ||||| || |||| || || ||||| || || || || ||||| Sbjct 607309 CATTTACC-TCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTA 607251 Query 16762 GTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 || | || || | | || ||||| || ||||| || | || || ||||||||||| Sbjct 607250 ATCAGACAGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTC 607191 Query 16822 CACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCG 16879 | ||| | || ||||| || || || || |||||| | | | ||||| Sbjct 607190 CGGAGGGATACCTTCTTTATCTTGGATCTTAGC--CTTCACATTTTCGATGGTGTCTGAA 607133 Query 16880 GGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT-TT 16938 | |||| || | ||||||||| || || || || |||||||| || ||||||||| || Sbjct 607132 GCCTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCTGCATTGTT 607073 Query 16939 GT 16940 || Sbjct 607072 GT 607071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404984959664290