Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq44 282 4e-71 seq158 154 1e-32 seq36 145 7e-30 seq62 96.9 3e-15 >seq44 Length=1464967 Score = 282 bits (312), Expect = 4e-71 Identities = 782/1185 (66%), Gaps = 23/1185 (2%) Strand=Plus/Minus Query 56986 TTAAGTAGGTCGCCGTTGTCGGCATCTATCTCCCATGCAAACAAACCACCAAGTTTCGAA 57045 ||||| | || |||||||| || ||||| ||||| || || | ||| || ||||| | Sbjct 1427571 TTAAGAATATCACCGTTGTCAGCGTCTATTTCCCAAGCGAAAAGACCGCCTAGTTTGTTA 1427512 Query 57046 TTTACCACATACTTTGCTTTGTCCGTCACGGAATCTACACTG-TCATAACTAATCAAA-- 57102 || |||||| || |||| || | || || || | | || || ||| ||| Sbjct 1427511 TTCCTCACATATTTGCCTTTCTCGATGACTGAC-CTCGAATCATCGTAGGTAA-CAAGGT 1427454 Query 57103 -TCCTGTGTTTCGGCATCGAAAACGCTTGCTGCCTTGGCCACGCTGTCGTA-TGAGTATG 57160 ||||||| | || ||| ||| || || | ||| || ||||||| ||| || | Sbjct 1427453 CTCCTGTGGAAGG--ATTGAAGACGTATGGAGCTTGGGCTACTTTGTCGTAGTGA-TAGG 1427397 Query 57161 TGTATCGACCTCGGTTTATTTCGCTTGCAATTTGCTTGTAATCAACCACGCCTTCCTCCC 57220 | | |||| | | ||| | | ||||| | | |||| || ||||| || |||| || Sbjct 1427396 TCCACTGACCACTGGCAATTCCATTGGCAATCTCCCTGTAGTCGACCACTCCGTCCTGCC 1427337 Query 57221 ACGTGCCGTGCACAGGCCCACTTCCTTTACCCGTGAACGGATTGTTGTCCGTGTAGTCGT 57280 | || || | ||||| ||| || || ||||| || | | |||| ||||||| | Sbjct 1427336 AAGTACCTTTAACAGGGCCATCAGCTACTCCTGTGAAGGGGATATCGTCCTTGTAGTCAT 1427277 Query 57281 GCACACCCGTCCATCCTCGACCGTACATGGCCACGCCAACCACTATTTTGTCAGCGGACA 57340 | || || |||||||| ||||||||||| || || || || || | || | | || Sbjct 1427276 GGACTCCAGTCCATCCACGACCGTACATAGCAACACCGACGACCAGCTTCTTGGGCTGCA 1427217 Query 57341 CGTTCTGCGCTAACAAAGTGCGTACAGCATTGTCTGTGGTATATGGTTCGCTAGGGTTCC 57400 | ||| || || | | | | | || ||| || || || | || | || |||| Sbjct 1427216 CTCCCTGAGCCAAAAGATACCTAATACCAAAGTCAGTAGTGTAAGTCTCCTTGGGTTTCC 1427157 Query 57401 ACAGAGGCGCATAAATGTTGGTTTGATAGCCCAAATTTGTGTTACT---CCAGGCACCTT 57457 || ||| || || | ||| || | ||| | | |||| | | |||||| || | Sbjct 1427156 ACTCAGGAGCGTATAACGAGGTCTGGTGGCCAAGA---GTGTCATTGGACCAGGCTCCCT 1427100 Query 57458 TAAAATCGTACGACATTAAGAATATGCTGTCGAGATATTTTTGCGCATGATTGTAATCGA 57517 | || ||||| ||| | ||| || ||| | || || || || | ||||| | || Sbjct 1427099 TGAAGTCGTAGCTCATCACGAAAATATGGTCCATGTAGTTCTGGGCTTCCTTGTAGTTGA 1427040 Query 57518 CAAGTTCGATTTTATCATTACCGGCGCCGATGGCTGTTGTGAGCAATAGT-TTACGATCA 57576 ||| | || || || || || | |||||| | || ||| | || || | || Sbjct 1427039 CAACCTGAATCTTGTCCCACCCAGCACTGATGGCAGAAGTCAGC--TCGTATTTCTTTCC 1426982 Query 57577 GTTTCCAGTTCC-AACTCGTCCAACATTAATCTCAAATCTTTCAATAGCCGCACGTATGT 57635 | | ||| |||||||||||||| ||| | || |||| || ||||||| | Sbjct 1426981 GGTCTCAGCGGATAACTCGTCCAACATGTGTCTAAGCTCCTTCATGAGTGTCACGTATAT 1426922 Query 57636 TTCTCCGTCGCGACCAGGGTCGCCCAACAAAGGATTAGCACCATTACCACCAGGAAATTC 57695 ||| || || | || | || | ||| ||||| || ||||| ||||| || || Sbjct 1426921 TTCACCATCTTTA---GGACCACCAAGGTCAGGGTTAGCTCCCTTACCTCCAGGGAACTC 1426865 Query 57696 CCAATCAATGTCGACTCCATCAAAAAATTTCCACACTTTGATGTAGTCGCGCACCGATTG 57755 ||||||||| || || ||||| || |||||||| | | |||| || || Sbjct 1426864 CCAATCAATATCAACGCCATCGAAGAATTTCCAGGTCTGTAAAAAGTCCTTGACTGAACC 1426805 Query 57756 CACAAAAGTGTTGCGAATAGTGTCGTCGTGCATGAAAAAGAAGGGATCCGATAAGGTCCA 57815 || || || | || | ||| | | ||| ||||||||||| | | |||||| Sbjct 1426804 AACGAAGCGGTCTCTCTTAACTTTGTCATCGAAGAAGAAGAAGGGATCAGCCAGGGTCCA 1426745 Query 57816 ACCACCAATGGATGGCAATACTTTTAGATGCGGATATGCTTTTTTGACCGCCATCAGTTG 57875 |||||| | || || | | || || | || | || | ||| | | ||||||||| Sbjct 1426744 ACCACCGACTGAAGGAAGAATCTTCAGGTCAGGTTTGGCCTGTTTCAACATCATCAGTTG 1426685 Query 57876 ACCAAAATTACCTTTGTAAGGTTCGTTCCAAGCCGATACTCCTTGTTGAGGCTTTTGTAG 57935 ||| ||||| || |||||||| || ||||| | ||||| || | || |||||||| | Sbjct 1426684 ACCGAAATTGCCCTTGTAAGGCTCATTCCAGGACGATAAGCCCTTCTGTGGCTTTTGCAA 1426625 Query 57936 CGCCGCCCAAGGATCGTGTATCGTTACTTTGAAATCTTCTCGGCCTGCACACGAACGTTG 57995 || |||||||||||||| || | ||||||||| ||||| || || || || ||||| Sbjct 1426624 AGCAGCCCAAGGATCGTGGATGGATACTTTGAAGTCTTCCCGACCGCTGCAGGAGCGTTG 1426565 Query 57996 CAACGCTTCAAAACTACCTGTAATCGTCTTTAGACTGTCGTTGATGCCATCGCCTCCGCA 58055 || |||| |||||||| ||| ||| | ||||||||| |||||||| || ||||| Sbjct 1426564 CAGTGCTTGGAAACTACCCTCAATTTCCTTCAAACTGTCGTTAATGCCATCACCGCCGCA 1426505 Query 58056 AATAGGCACGAAACCGTACAACAAATGAGTCAAATTGGGTACGGGTACTTTATCAACTGG 58115 ||| || | ||| |||||||| || || |||| ||||| ||||| ||||| || || || Sbjct 1426504 AATCGGGATGAAGCCGTACAATAAGTGGGTCAGGTTGGGAACGGGAACTTTGTCTACGGG 1426445 Query 58116 ATATTTACGACCGTACACACTCCACTCCACGAAATAAGCTCCCAC 58160 | || || |||||| | ||| || ||||| || || || || Sbjct 1426444 GAACTTTCGCGGGTACACGCCCCATTCTACGAAGTACGCACCGAC 1426400 >seq158 Length=707457 Score = 154 bits (170), Expect = 1e-32 Identities = 179/240 (75%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||||||||| ||||| || || || | || || || ||||||| | || |||||| | Sbjct 607073 AACAATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGC 607132 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| ||||| ||||| || ||| || |||||||| || || || || Sbjct 607133 TTCAGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGA 607192 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | || || |||||||| || || ||||||| || ||| || ||||| Sbjct 607193 CCAACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTA 607252 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG-AAATTATT 25233 |||||| || ||||||||||| || || || ||||| ||||| |||||||| |||| ||| Sbjct 607253 CAATATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTAGAGGAGGTAAATGATT 607312 >seq36 Length=1647457 Score = 145 bits (160), Expect = 7e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || ||||||||||| || || ||| | ||||| | ||||| ||| | || Sbjct 937746 AATGCAGATCTTCGTAAAGACTTTAACTGGGAAAACTATCACTTTGGAAGTTGAGCCTTC 937687 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| |||||| ||||||||||| ||||| || || || Sbjct 937686 AGACACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 937627 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||||||||| || || |||||||||| |||||| | || ||||| Sbjct 937626 GCAGCGTCTCATTTTTGCCGGAAAGCAGTTAGAAGATGGGCGCACTCTATCAGACTACAA 937567 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || |||||||| || || || ||||| Sbjct 937566 CATTCAGAAGGAATCCACACTTCACTTGGTGCT 937534 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||| ||||||||||| | |||||| | ||||||||| | ||| Sbjct 935762 ATGCAAATATTCGTTAAGACGCTGACCGGTAAAACGATCACACTTGAAGTGGAGCCTTCT 935703 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | || || |||| ||| ||||| ||||| ||||| || || || Sbjct 935702 GACACAATTGAGAATGTTAAGGCCAAAATTCA-GGACAAGGAAGGCATTCCTCCGGATCA 935644 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||| |||||||| || || | || || | || ||| | ||| ||||| Sbjct 935643 GCAGCGACTTATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAA 935584 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 ||| ||||| ||||| || | |||||||| ||| Sbjct 935583 TATCCAAAAGGAATCTACTTTGCATTTAGTACTA 935550 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || |||||| ||||||| | || || ||| | || Sbjct 455374 ATGCAGATCTTTGTCAAAACCCTCACAGGTAAAACCATCACCCTTGAGGTTGAGCCTTCA 455433 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| ||| ||| ||||||||||| ||||| || ||||| Sbjct 455434 GACACTATCGAGAATGTTAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455493 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||||||||| | || |||| ||||| | |||||||| Sbjct 455494 CAGCGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCTGATTACAAC 455553 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||||||| || || || || || Sbjct 455554 ATTCAAAAGGAATCCACCCTGCACTTGGTACT 455585 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||| || ||||| |||||| ||||||| ||||||| ||| |||| Sbjct 454918 ATGCAGATTTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCCGTCA 454977 Query 25059 GACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| ||| ||| |||| |||| ||| || || ||||| ||||| || || Sbjct 454978 GACACTATTGAGAACGTCA---AAGCTAAAATTCAA-GATAAGGAAGGTATTCCCCCAGA 455033 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | || ||||| || || ||||||||||| | ||||| | ||||| Sbjct 455034 TCAGCAGCGACTGATCTTTGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTA 455093 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || | ||||| Sbjct 455094 TAACATCCAGAAGGAGTCAACTCTTCACCTGGTGCT 455129 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | || || ||| | || ||| | |||||||| | ||| Sbjct 455602 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACTATTACACTGGAAGTGGAACCATCT 455661 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| ||| | ||| || ||| ||||| || || ||||| || ||||| Sbjct 455662 GACACTATTGAGAATGTAAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 455721 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||||||||| | || |||| ||||| | |||||||| Sbjct 455722 CAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGCACCCTTTCTGATTACAAC 455781 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||||||| || || || || || Sbjct 455782 ATTCAAAAGGAATCCACCCTGCACTTGGTACT 455813 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || ||| | || || | ||||| ||| | ||| Sbjct 456055 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACTATTACTCTTGAAGTTGAGCCTTCT 456114 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| ||| ||| ||||||||||| ||||| || ||||| Sbjct 456115 GACACCATTGAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 456174 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || |||||||| | || |||| ||||| | ||| ||||| Sbjct 456175 CAGCGATTGATCTTCGCTGGCAAACAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 456234 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || || || || || || || | ||||| | || | || |||||||| Sbjct 456235 ATCCAGAAGGAGTCTACTCTTCACCTGGTGCTTCGTCTTCGCGGTGGAAATTA 456287 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | || || ||| | || ||| | |||||||| | ||| Sbjct 455830 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACAATTACACTGGAAGTGGAACCATCT 455889 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||| ||| | ||| ||| ||| ||||||||||| ||||| || ||||| Sbjct 455890 GACACT---GAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455946 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||||||||| | || |||| ||||| | || ||||| Sbjct 455947 CAGCGATTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCAGACTACAAC 456006 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || || || || | ||||| Sbjct 456007 ATCCAGAAAGAGTCAACTCTTCACCTGGTGCT 456038 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || ||| | ||||| | || || ||| | || Sbjct 455146 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACAATCACCCTTGAGGTTGAGCCTTCA 455205 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| || ||| ||||||||||| ||||| || |||||| Sbjct 455206 GACACTATTGAAAATGTAAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAA 455265 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||||||||| | || |||| || || | ||| ||||| Sbjct 455266 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGTACCCTTTCCGACTACAAC 455325 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 455326 ATCCAGAAGGAGTCAACTCTTCACCTGGTGCT 455357 >seq62 Length=1252031 Score = 96.9 bits (106), Expect = 3e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 51106 GGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATG 51165 ||||| | ||||| | |||||| |||||||| ||| |||| || || | || Sbjct 685992 GGATCCCTTCCATCAATGCTGTAGTGATCGTTAAGATATATCGCGTACTTGAGCGCGTCT 685933 Query 51166 TCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGC 51225 || | || |||||||| || | ||| || || |||||||||||||| | | |||||| Sbjct 685932 TCCGGGCTGGGCGTCCACTCGAGAATCTTTTTACACCAGTACATGCGCAGGAACCCGTGC 685873 Query 51226 ATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281 || |||||||| || ||| ||||||||||||||||| || |||||||| Sbjct 685872 ATTTTGCCCTCCTTGACCAGTTGCAGTTGAGCCGAGTTCCACAGGTCATCGTGAGT 685817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433217776387865