Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq200 192 7e-44 seq329 132 5e-26 seq67 132 5e-26 seq16 132 5e-26 seq217 131 2e-25 seq161 131 2e-25 seq10 127 2e-24 seq5 127 2e-24 seq18 123 3e-23 >seq200 Length=575180 Score = 192 bits (212), Expect = 7e-44 Identities = 181/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 || |||| || ||||| ||||| | || || ||||| || || || ||||||||||| Sbjct 474204 GAGTCTCTGATATATGTGTCGATGAGCAATGAGTACATCTCTGAGTGCACATTCTCCATG 474145 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 || |||||||||||||||||||| || || ||||| | ||||||||||| || |||||| Sbjct 474144 GCTATTTGGAATCCGTAGAAACACCTTGCCTCCGTCACTTGCACTTCTTGCGAGAATCTC 474085 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || || |||||||||||||| ||||| || ||||| ||||| || |||| || |||||| Sbjct 474084 TCAACAAGATTTTCATTGACAATACCGTCAGATGCAGCAAAGAATGCCAGTACATGCTTG 474025 Query 93533 ATAAAATGTTTCTC-ATCATCTTTAAGCTTATCCCAATCGGATAGATC 93579 || |||||| |||| | ||||||| || ||||| || || ||||| Sbjct 474024 ATGAAATGTCTCTCGCTGTCCTTTAAGGTT-TCCCAGTCTGACAGATC 473978 Score = 129 bits (142), Expect = 7e-25 Identities = 169/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 93110 AAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGT 93169 |||||| | |||| || ||||||||||||||||| || | || || | ||||| || Sbjct 474940 AAACCT-CATCTCTAGAGATCAACTCATTGCTGAAGGTAAGTCCAGGCATGAGTCCACGC 474882 Query 93170 TTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCA 93229 ||||| ||||| ||||| || ||||| || ||||| || || || ||||| ||||| ||| Sbjct 474881 TTCTTCAGCCAGAATATGGAGGCAAAGCTTCCAGAGAAGAAAATGCCTTCGACGGCGGCA 474822 Query 93230 AATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAA 93289 || ||||| || | ||| | || | |||| || || |||||| | | ||||| Sbjct 474821 AAAGCCACGATCCTCTCGCCGAAGGTGGCGGTCTTGCTCGCGATCCACTGCAGCGCCCAG 474762 Query 93290 TCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || || || ||||| | ||| || | || || || ||||| || ||| |||| Sbjct 474761 TCTGCCTTCTTCTTCACACATGGCAAAGTCTCAATGGCGTTGAACAGGAAATC 474709 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||| ||||| ||||| || || ||||| || || ||||| || ||||||||||| ||| Sbjct 473531 TTTGATAGATCAACTTCCTCCACGGTCCAGAAAGAAGCTTCGGCCTTTTTGTACATCTCC 473472 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679 || || || | |||||||| || || || ||||| ||| Sbjct 473471 CAAATATCAGGGTATTGAATGGGGAAAATAACAAAGCGA 473433 >seq329 Length=321524 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 149835 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGA 149776 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||||| Sbjct 149775 GCGTGGGTTCGAACCCCACACCTGACA 149749 >seq67 Length=1314435 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 314300 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 314241 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 314240 GTGGGTTCGAACCCCACACCTGACAAA 314214 >seq16 Length=2071399 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 448975 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 448916 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 448915 GTGGGTTCGAACCCCACACCTGACAAA 448889 Score = 123 bits (136), Expect = 3e-23 Identities = 80/87 (92%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 411088 AGTCAGGTTGGCCGAGTGGTCTACGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 411147 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||| ||||||||||||||||| Sbjct 411148 GTGGGTTCGTACCCCACACCTGACAAA 411174 >seq217 Length=517277 Score = 131 bits (144), Expect = 2e-25 Identities = 89/98 (91%), Gaps = 4/98 (4%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 270669 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 270610 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA--TTATTG 126358 ||||||||||||||||||||||||| ||| |||||| Sbjct 270609 GTGGGTTCGAACCCCACACCTGACAGGTTAGTTTATTG 270572 >seq161 Length=692752 Score = 131 bits (144), Expect = 2e-25 Identities = 81/86 (94%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 690532 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 690591 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 690592 TGGGTTCGAACCCCACACCTGACAAA 690617 >seq10 Length=2227192 Score = 127 bits (140), Expect = 2e-24 Identities = 79/84 (94%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 345934 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 345875 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 345874 TGGGTTCGAACCCCACACCTGACA 345851 >seq5 Length=2886276 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| Sbjct 1098991 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGAGAGGGAGC 1099050 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 1099051 GTGGGTTCGAACCCCACACCTGACAAA 1099077 >seq18 Length=2017555 Score = 123 bits (136), Expect = 3e-23 Identities = 80/87 (92%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 ||||||||||||||||||||||||||||||||||| | ||| |||||||||| |||| Sbjct 1029271 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCCCGAGAGGGA 1029212 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||||| Sbjct 1029211 GCGTGGGTTCGAACCCCACACCTGACA 1029185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556715521978040