Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq44 275 4e-69 seq158 100 2e-16 >seq44 Length=1464967 Score = 275 bits (304), Expect = 4e-69 Identities = 432/612 (71%), Gaps = 15/612 (2%) Strand=Plus/Minus Query 84237 GGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTC 84296 ||||| ||||| || ||||| || || |||||||| || || || || ||||| |||||| Sbjct 1426893 GGGTTAGCTCCCTTACCTCCAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTC 1426834 Query 84297 CATACTTGTAAAAACTCCTTAACCGAATTTACAAAAACGTTTCTTTTTTCAACATTGTGC 84356 || |||||||| ||||| || ||| || || || ||| || ||| |||| | Sbjct 1426833 CAGGTCTGTAAAAAGTCCTTGACTGAACCAACGAAGCGGTCTCTCTT---AACTTTGT-C 1426778 Query 84357 ATGAAATAA----AACGGGTCCGACAACGTCCATCCTCCTATGGACGGAAGAATCTTTAG 84412 || || || || || || | || ||||| || || | || ||||||||||| || Sbjct 1426777 ATCGAAGAAGAAGAAGGGATCAGCCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAG 1426718 Query 84413 GTGCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATACGGTTCGTT 84472 || || || ||| ||| ||||| ||| || |||||||| || || || || || Sbjct 1426717 GTCAGGTTTGGCCTGTTTCAACATCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATT 1426658 Query 84473 CCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGGATGGCAAT 84532 ||| | || | |||||| || |||||||| | || ||||| ||||||||||||| | Sbjct 1426657 CCAGGACGATAAGCCCTTCTGTGGCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATAC 1426598 Query 84533 TTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCGGGTATCAC 84592 ||| || || | || || ||||| || |||||||| | || ||||||||| || | Sbjct 1426597 TTTGAAGTCTTCCCGACCGCTGCAGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTC 1426538 Query 84593 TTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTACAACAAGTG 84652 || | | ||||| || |||| |||||||||||| || ||||| |||||||| ||||| Sbjct 1426537 CTTCAAACTGTCGTTAATGCCATCACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTG 1426478 Query 84653 TGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACTCCCCATTC 84712 | | || || | |||||||||||||||||| || || ||| |||||| |||||||| Sbjct 1426477 GGTCAGGTTGGGAACGGGAACTTTGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTC 1426418 Query 84713 AACAAAATACGCAGCAACCGTTTTATC----GTCTCTTCTGCCCGGTTTGTTGTTTTCCC 84768 || || |||||| | || |||| | |||| | || || || || || || | Sbjct 1426417 TACGAAGTACGCACCGACAACTTTACCAGAGGTCTGCT-TGAATGGCTTATTCTTCTCTC 1426359 Query 84769 GCCAT-GTATATTCCAGCGGAGCCAAATGACCGCCGTCGGTGTCTGCCACTTTGACCAAC 84827 | || || |||| || || | || || | ||||||||||| ||||| || | | Sbjct 1426358 -CGATGGTGAATTCTAGAGGCGGTAAGTGGCTACCGTCGGTGTCAGCCACAACGATCTCC 1426300 Query 84828 ACGGAATCGCTC 84839 || || |||||| Sbjct 1426299 ACCGACTCGCTC 1426288 >seq158 Length=707457 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| ||||| | ||||| ||||||| || ||||| ||| | || ||| || | Sbjct 607076 AATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGCTTC 607135 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || | ||| || || |||||||| ||| | ||| |||| Sbjct 607136 AGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGACCA 607195 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||| |||| ||||| || ||||| || | |||||| ||| || | |||||||| Sbjct 607196 ACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTACAA 607255 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGT-ATTACGTTTACGAGGAGG 22060 ||| ||||| ||||| |||||||| |||| ||| | ||| ||||||| Sbjct 607256 TATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTA-GAGGAGG 607303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358033705473334