Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq44 174 1e-38 seq36 122 7e-23 seq158 104 2e-17 >seq44 Length=1464967 Score = 174 bits (192), Expect = 1e-38 Identities = 340/502 (68%), Gaps = 23/502 (5%) Strand=Plus/Plus Query 20445 TGCATATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTCCCGTCGACAAGGTACCCGT 20504 ||| || || |||||||||||||| || || || | || ||||| ||||| || ||||| Sbjct 1426405 TGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGACAAAGTTCCCGT 1426464 Query 20505 TCCCAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTATCAA 20564 |||||| || | || | | || ||||| | || ||||||||||| ||||| || || Sbjct 1426465 TCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGGTGATGGCATTAA 1426524 Query 20565 CGACGCGTTAAAG----TTGTCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGCG 20620 |||| || ||| ||| || ||||| ||| ||||||| || ||| Sbjct 1426525 CGACAGTTTGAAGGAAATTGA-------GGGTAGTTTCCAAGCACTGCAACGCTCCTGCA 1426577 Query 20621 CGGGCCGAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCAC 20680 || || || | || ||||| |||| |||||||||||||| ||| | || || |||| Sbjct 1426578 GCGGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCAAAAGCCAC 1426637 Query 20681 AAAAAGGAGTATCCTCTTGGAACGAACCGTACAAAGGAAACTTTGGTCAGTTGATGGCAA 20740 | || || |||| || ||||| || || ||||| || || || ||||| ||||| Sbjct 1426638 AGAAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACTGATGATGT 1426697 Query 20741 CGAAACTGGCGTATCCTCATCTTAAAGTGCTACCTTCGATCGGCGGGTGGACTTTATCCG 20800 ||||| ||| | ||| | || || | || ||||| |||| || ||||| | | | Sbjct 1426698 TGAAACAGGCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGTTGGACCCTGGCTG 1426757 Query 20801 ATCCGTT----TTATCATATG--CACGATCCGATCGTACGCCAAGTTTTCATCGATTCTG 20854 |||| || || | ||| | | | || | ||| ||| | | ||| | Sbjct 1426758 ATCCCTTCTTCTTCTTCGATGACAAAGTTAAGAGAGACCGC------TTCGTTGGTTCAG 1426811 Query 20855 TGGAAGAGTTTTTGTTGACGTGGAAATTCTTTGACGGCGTTGACATAGACTGGGAGTTTC 20914 | | || ||||| ||| ||||||||||| || |||||||| || || |||||||| | Sbjct 1426812 TCAAGGACTTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGGAGTTCC 1426871 Query 20915 CGGGAGGCAAAGGTGCGAATCC 20936 | ||||| || || || || || Sbjct 1426872 CTGGAGGTAAGGGAGCTAACCC 1426893 >seq36 Length=1647457 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || ||||| | |||||||| | || || ||||| |||||||||||||| Sbjct 937288 ATTCCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCT 937347 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || || ||||| ||||| || || |||| || ||||| || || ||| Sbjct 937348 GACAGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGA 937407 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||||||||| || || || ||| | |||| | | |||| ||||| | | ||| Sbjct 937408 GGAATGCCTTCCTTATCCTGGAT-TTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTC 937466 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | |||||||| ||||| || || |||||||| ||||| Sbjct 937467 CACTTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || || |||||||| ||| Sbjct 455375 ATACCACCACGAAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCG 455316 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| ||||| ||||| || ||| |||| | |||||||||||| || Sbjct 455315 GAAAGGGTACGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGG 455256 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||||| |||| | ||||| ||||| | | || Sbjct 455255 GGAATGCCTTCTTTGTCTTGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCA 455196 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| || || || || ||||| |||||||| Sbjct 455195 ACCTCAAGGGTGATTGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || |||| | |||||||| | |||||||| ||||| || ||||| ||| Sbjct 935536 CCGCCGCGAAGTCGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAG 935595 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| || || || || ||||| || |||| || ||||| || ||||||||| Sbjct 935596 AGAGTACGGCCGTCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGA 935655 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||||| ||||| ||| ||| | ||| | | |||| ||||| | | || || Sbjct 935656 ATGCCTTCCTTGTCCTGAAT-TTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCAC 935714 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | |||||| |||||||| || || || || || ||||| Sbjct 935715 TTCAAGTGTGATCGTTTTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || ||||| ||||||||||||||||| Sbjct 455603 ATACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCA 455544 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| ||||| || || |||| | ||||| ||||| || Sbjct 455543 GAAAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGG 455484 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| |||||| || | | || | ||||| | | || Sbjct 455483 GGAATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCA 455424 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||||| || || || ||||| ||||| |||||||| Sbjct 455423 ACCTCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || ||||| ||||||||||||||||| Sbjct 455831 ATACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCA 455772 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || ||||| || ||| |||| | ||||| ||||| || Sbjct 455771 GAAAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGG 455712 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| |||| | |||| ||||| | | ||| Sbjct 455711 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCC 455652 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || |||||||| || || |||||||| Sbjct 455651 ACTTCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| | || || ||| || || ||||| ||| Sbjct 456251 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGTTTGCCA 456192 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||| ||||| || ||||||||||||||||| |||||| ||| Sbjct 456191 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTT 456132 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | || || || | || | |||||||| || || || Sbjct 456131 ACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTGCCAGTAAGGGTC 456072 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 456071 TTGACAAAGATCTGCAT 456055 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || ||||| || |||||||| || Sbjct 456056 ATACCACCACGCAGACGGAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCT 455997 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| ||||| || ||| |||| | ||||| ||||| || Sbjct 455996 GAAAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGG 455937 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| |||||| |||| | ||| ||||| | | ||| Sbjct 455936 GGAATGCCTTCTTTGTCTTGGATCTTTGCCTTTACATTCTCA---GTGTCAGATGGTTCC 455880 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || |||||||| || || |||||||| Sbjct 455879 ACTTCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || ||||| || ||||||||||| || Sbjct 937516 ATACCACCGCGGAGGCGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCT 937575 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| | || || || || | ||||||||||| || || ||| Sbjct 937576 GATAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGA 937635 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| || || || | | ||||| ||||| | | || Sbjct 937636 GGAATGCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCA 937695 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | ||| ||||| || |||||||| Sbjct 937696 ACTTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCAT 937745 >seq158 Length=707457 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || || |||||||| || |||||| |||||| | || || || Sbjct 607273 GTGGATTCTTTCTGGATATTGTAATCAGACAGAGTACGGCCATCTTCCAACTGCTTGCCG 607214 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct 607213 GCGAAGATGAGTCGCTGTTGGTCCGGAGGGATACCTTCTTTATCTTGGATCTTAGCCTTC 607154 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||| | | || || || | ||| | || || || || || ||| Sbjct 607153 ACATTTTCGATGGTGTCTGAAGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTT 607094 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 607093 TTGACGAATATCTGCAT 607077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420027532382052