Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq200 152 1e-31 >seq200 Length=575180 Score = 152 bits (168), Expect = 1e-31 Identities = 155/197 (79%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| ||||| |||| || | ||||||||||| ||||||||||| | Sbjct 474715 CTGTTCAACGCCATTGAGACTTTGCCATGTGTGAAGAAGAAGGCAGACTGGGCGCTGCAG 474774 Query 42669 TGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||||| ||| | || ||| || |||||||||||| | || || ||| |||||||||| Sbjct 474775 TGGATCGCGAG-CAAGACCGCCACCTTCGGCGAGAGGATCGTGGCTTTTGCCGCCGTCGA 474833 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGA 42786 ||||| |||||||| || ||| |||||||| |||||||| ||| || || || | Sbjct 474834 AGGCATTTTCTTCTCTGGAAGCTTTGCCTCCATATTCTGGCTGAAGAAGCGTGGACTC-A 474892 Query 42787 TGCCCGGACTCACCTTC 42803 |||| ||||| |||||| Sbjct 474893 TGCCTGGACTTACCTTC 474909 Score = 105 bits (116), Expect = 1e-17 Identities = 140/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888 |||| |||| | || || || ||||| ||||| | ||||| ||| ||||| Sbjct 475881 AGGGTTTGCACACCGATTTCGCATGCCTGATGTTCCGG---CACCTGGTGCAAAAGCCAA 475937 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 |||| | | || | |||||| | ||| || ||| ||||||| |||||||||||| Sbjct 475938 GCAAGGCGTGCGTGCTAAACATCATTAAGGATGCAGTGCTGATCGAGCAGGAGTTCCTCA 475997 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 | | ||||||||||| |||| ||||||||||| |||||||||| |||||||| Sbjct 475998 CCGACGCGCTGCCCGTGCGCCTGCTCGGCATGAACTGTGACCTCATGTCACAGTACATCG 476057 Query 43009 AGTACGTCGCCGAC 43022 ||| ||| |||||| Sbjct 476058 AGTTCGTAGCCGAC 476071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944092833706960