Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq134 96.9 3e-15 >seq134 Length=761937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 ||||| | || |||| ||||| ||||| | |||||||||||| || || || || ||| Sbjct 24561 CCAGTGATGTGTGCAATCATATGTGTTAATAAGGAATAGCTGGCTATATTGAATGGCACT 24620 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || || |||||||| | || ||||| ||||| || || | | || || ||| Sbjct 24621 CCTAAGCCCATGTCAGCACTTCTTTGATATAGCTGGCAAGATAATTTTCCACTGGCCACA 24680 Query 20360 TAAAATTGA-CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418 || |||||| | |||| || || || || || ||||| ||| | ||| | || || Sbjct 24681 TAGAATTGAGCCAGACAA-TGGCATGGTGGTAGAGCCATTAACCCAAGGTCTGAAGGATT 24739 Query 20419 CCACGCACACATAATGATTCTTCTATC 20445 ||| |||||||| || ||||| ||||| Sbjct 24740 CCATGCACACATTATCATTCTCCTATC 24766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441257651353640