Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq616 190 2e-43 seq36 143 3e-29 seq158 114 1e-20 seq4 105 7e-18 >seq616 Length=113079 Score = 190 bits (210), Expect = 2e-43 Identities = 555/847 (66%), Gaps = 11/847 (1%) Strand=Plus/Plus Query 154586 AGACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCA 154645 ||| ||||| |||||||| |||| || |||| | |||| | ||| ||||| | || Sbjct 36050 AGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACA 36109 Query 154646 CAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTC 154705 |||||| ||||| ||| || || || ||||| || || |||| |||||| | ||| Sbjct 36110 CAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTC 36169 Query 154706 TTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTG--TGCGAAAC 154763 ||| ||||| || || || || |||||||| ||||| | ||| ||||| | | | | | Sbjct 36170 TTTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACAG 36229 Query 154764 AGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGT 154823 || || | || | |||||| | |||||||||||| | ||||||| | ||| ||| Sbjct 36230 AGCCT--GAGCTTTAACTTGCTTAACAAATCGATTTTCTTTTTCATATTTCTTGTATAGT 36287 Query 154824 TTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAAT 154883 ||||| ||| | | || | || || |||||| | |||||||| | Sbjct 36288 GCCTCAAATTCTTCTCCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAGA 36347 Query 154884 GACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTAC 154943 ||| |||| || | ||| | ||||||||| ||||| || | ||| ||||| || Sbjct 36348 CTCCAATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAA 36407 Query 154944 AACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCA 155003 || | || | || | ||||| ||| | ||| || | || || || || Sbjct 36408 AAGAGTTCTCTAGCTCGTACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTCG 36467 Query 155004 TATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGT---TTTCCT 155060 | || || || ||||| || || || ||||| || | || || ||| || || Sbjct 36468 AAAATATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCCC 36527 Query 155061 CCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTG 155120 |||||||| || | | || ||| || ||||| ||||||| || | | ||| || Sbjct 36528 CCTTGATCTACATATCTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATTG 36587 Query 155121 GCCGTGCCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACG 155180 | || || || ||| || |||| || | ||||||| || Sbjct 36588 GAGACACCATTTGTTCCAGCAATATAAGTGCCTTTGGCTCTTATGCAGTGAACATGGACT 36647 Query 155181 CCCAAACCTCCGCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCT 155240 || | |||||| | ||||||||||| ||||| | | || || || || || ||| Sbjct 36648 CCAATACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATATGCCT 36707 Query 155241 TTGATGCTGTCTTCTTTCAACGTCAAC-AAGAAACACGAAGATAATTGAGGTTGAGGGCA 155299 | || || || || |||| | |||| ||||| || ||||||| || ||| | || Sbjct 36708 TCAATACTATCATCCTTCATTG-CAACTAAGAAGCATGAAGATAGCTGTGGTCGTGGCGT 36766 Query 155300 GCCGGCCGCAAATAATGTAGGACTAGCGTGTGT-AAACATTTTGTTGGCGGTTAAGTTGT 155358 | || | ||||||||| || || || || || ||| ||||| | | | ||| || | Sbjct 36767 TGCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAG-TAAATTAT 36825 Query 155359 AAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCA 155418 | || || || || || ||||| || ||||||||| || || | ||| |||||||||| Sbjct 36826 ATGTATCAATTGCAGCATCAATATCTTCACCGTGTATTCCTATAGACACACGCATCAGCA 36885 Query 155419 TGTGTTG 155425 ||||||| Sbjct 36886 TGTGTTG 36892 Score = 118 bits (130), Expect = 1e-21 Identities = 324/493 (66%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 154014 TGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTG 154073 || || |||| |||||||| || || | | ||||| | | ||| | |||| ||| Sbjct 35475 TGGTGATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCTGATATATATTGGAGGTT 35534 Query 154074 AACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATAC 154133 | || || || || || || ||||| | ||||||||||||| |||||||||||| Sbjct 35535 ATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCATGGGA 35594 Query 154134 GCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAA 154193 || || || | ||||||| | || ||||||||||| ||| || | | ||| Sbjct 35595 GCTACTAAAAGTGAGTTTCTAAGGCCATGTTTTGCAATTTTTTCTTTCAAGGCAGTCCAG 35654 Query 154194 TTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCC 154253 | ||||||||| || || | |||||||| |||||||| |||| || |||||| Sbjct 35655 TCCCACAAGTTAGTTGGAGTCTTATTCCACATATCGTATTGTAAAATTCCTTGGCTCGCC 35714 Query 154254 GGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTT--GCCAAGTCGCAACTGGCTT 154311 |||||| | |||| | || || | | |||| || || | || || |||| Sbjct 35715 GGACTGCCTTCATAAGTTTCATAGACTCCAT--ATTTTTCGGCTAATTGACAGCTTGCTT 35772 Query 154312 CTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCAC 154371 | | || | || || | ||||| ||||||| |||| | || |||| |||| Sbjct 35773 CAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGATTTAGCTTTATGGCCGGTTCAC 35832 Query 154372 TTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAA 154431 | ||||| || | | || | | ||| | || || | ||||| | || | |||| Sbjct 35833 TATCGTATGGAATACGCATAAGAATAAATGTGTCTGCTAATCCTTGCACTCCTATACCAA 35892 Query 154432 CGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGA---GGATAATAATTGATAT 154488 ||||||||| | | ||| ||| ||| ||| || || || |||||||| | | Sbjct 35893 TTGGTCTGTGTCTCATATTGGATGTTTT---AGCTTCAGGAACTGGGTAATAATTAACTT 35949 Query 154489 CGATAATTTTATT 154501 | ||||||||||| Sbjct 35950 CAATAATTTTATT 35962 >seq36 Length=1647457 Score = 143 bits (158), Expect = 3e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||||| | |||| || ||||| || ||||||||||| |||| Sbjct 937518 ACCACCGCGGAGGCGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGA 937577 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | |||||| |||||| ||||||| |||||||| || ||||| Sbjct 937578 TAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGG 937637 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| ||||| ||| ||| || | || || | || || Sbjct 937638 AATGCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAAC 937697 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449 ||| | ||| | || || || || ||||| |||||||| || |||||||| || Sbjct 937698 TTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCATTTTGAT 937751 Score = 138 bits (152), Expect = 1e-27 Identities = 174/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || |||| || || || || || ||||| ||||||| Sbjct 455145 ACCACCGCGCAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGA 455086 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| ||||||| | ||||| || ||| | || || |||||||| || || || Sbjct 455085 GAGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGG 455026 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCAC-CGGCGTCC 64393 ||| ||||| || ||||| ||||| ||||| || ||| | || || |||| || Sbjct 455025 AATACCTTCCTTATCTTGAATTTTA-GCTTTGACGTTCTCAATAGTGTCTGACGGC-TCA 454968 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447 ||||| | ||| | ||| || || ||||| |||||||||||||| ||||| ||| Sbjct 454967 ACTTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGCATCTTA 454914 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | ||| || |||| ||| | || || ||||| |||||||||||||||| Sbjct 937291 CCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGAC 937350 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| |||||||| || |||||| | || || |||||||| || |||||| Sbjct 937351 AGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGA 937410 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || | |||| ||||| ||| ||| | ||| || | ||||| Sbjct 937411 ATGCCTTCCTTATCCTGGA-TTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCAC 937469 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | || ||||| |||| || || || ||||||||||| Sbjct 937470 TTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 125 bits (138), Expect = 7e-24 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || |||| || || ||||| || |||||||| |||| Sbjct 456054 ACCACCACGCAGACGGAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGA 455995 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || |||||||| |||||||| | || | ||||||||||| || || Sbjct 455994 AAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 455935 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || ||| ||||||| | | | || ||| | ||||| Sbjct 455934 AATGCCTTCTTTGTCTTGGATCTTTGCCTTTACA---TTCTCAGTGTCAGATGGTTCCAC 455878 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | || || || || | |||||| ||||| || ||||| Sbjct 455877 TTCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || | || | || ||||| ||||||||||||||||| | Sbjct 455601 ACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGA 455542 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || |||||||| ||||||||| | || | ||||||||||| || || Sbjct 455541 AAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGG 455482 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || ||| ||| ||| ||| | || || | || || Sbjct 455481 AATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAAC 455422 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||| || || || | ||||| || || || ||||| Sbjct 455421 CTCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || | || | || ||||| ||||||||||||||||| | Sbjct 455829 ACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGA 455770 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || ||||| |||||||| | || | ||||||||||| || || Sbjct 455769 AAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 455710 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||||||| ||| | || ||| | ||||| Sbjct 455709 AATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCAC 455650 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | || || || || | |||||| ||||| || ||||| Sbjct 455649 TTCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | |||||| || |||| || || || || || |||||||| || | | Sbjct 456281 CCACCGCGAAGACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 456222 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || ||||| ||||| || | || | ||||||||||| || ||| Sbjct 456221 AGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 456162 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| ||||| || ||| ||||||| ||| | || ||| | || ||| Sbjct 456161 ATGCCTTCTTTGTCTTGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACT 456102 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | || ||||| || | || || || || || ||||| Sbjct 456101 TCAAGAGTAATAGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 >seq158 Length=707457 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 |||||||| | |||| || |||||||| || || |||||||| | | || || | Sbjct 607291 CTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGTACGGCCA 607232 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| | |||||||||||| | ||||| ||||| ||||| ||||| || |||||||| Sbjct 607231 TCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAGGGATACCTTCTTTA 607172 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| || || ||| ||| || | || || || ||||| || | || | | Sbjct 607171 TCTTGGATCTTAGCCTTCACATTTTCGATGGTGTCTGAAGCCTCCACCTCAAGGGTGATG 607112 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || || | ||||| ||||| || |||||| Sbjct 607111 GTCTTCCCCGTTAGGGTTTTGACGAATATCTGCATT 607076 >seq4 Length=2913607 Score = 105 bits (116), Expect = 7e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 115366 GCACGGTTTTCATGTTCACGAATTCGGCGACACTAGCAACGGCTGCACGTCCGCCGGCGA 115425 ||||||||| || || || || ||||| |||| | ||||||||||| || ||||||| Sbjct 2347857 GCACGGTTTCCACGTGCATGAGTTCGGTGACAACACAAACGGCTGCACATCGGCCGGCGC 2347916 Query 115426 GCATTTCAACCCGTTTAACCAAGATCACGGCGCACCGAACGCACCCGTCCGCCACGTCGG 115485 ||| || |||||| | || || || ||||| | || |||| |||| || |||||||| Sbjct 2347917 GCACTTTAACCCGCTGAAGCAGGAGCACGGTGGCCCCGACGCGTCCGTGCGTCACGTCGG 2347976 Query 115486 TGATCTGGGCAAC 115498 |||||| |||||| Sbjct 2347977 TGATCTCGGCAAC 2347989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499514448917240