Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq44 257 2e-63 seq4 114 1e-20 seq36 111 2e-19 seq116 89.7 5e-13 seq158 84.2 2e-11 >seq44 Length=1464967 Score = 257 bits (284), Expect = 2e-63 Identities = 361/505 (71%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 27995 aaaaTTGTGGCCGCCTATTTCGTCGAGTGGGGCGTGTATCTGCGGCAGTTTCCCGTCGAC 28054 ||| |||| | || || ||||| || ||||||||||| | ||| |||| ||||| ||| Sbjct 1426394 AAAGTTGTCGGTGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGAC 1426453 Query 28055 AAAGTGCCCGCGCCCAACCTGTCGCACTTGCTGTACGGTTTCGTGCCGATATGCGGCGGC 28114 ||||| |||| ||||||||| | ||||| ||||||| ||| | ||||| |||||||| Sbjct 1426454 AAAGTTCCCGTTCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGGT 1426513 Query 28115 GACGGCATAAACGACGCCCTCAAGACCGTTCCCGGCAGTTTCGAGGCGCTGCAGCGCTCG 28174 || ||||| |||||| | ||| || || |||||| | || ||||| ||||| Sbjct 1426514 GATGGCATTAACGACAGTTTGAAGGAAATTGAGGGTAGTTTCCAAGCACTGCAACGCTCC 1426573 Query 28175 TGCGCCGGGCGCGCCGACTTCAAGGTGACGATCCACGATCCCTGGGCCGCCATTCAGAAG 28234 ||| ||| || | |||||||| || | ||||||||||| ||||| || | || ||| Sbjct 1426574 TGCAGCGGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCAAAAG 1426633 Query 28235 CCGCAAAAGGGCGTCTCTACGTGGAACGAGCCGTACAAAGGCAACTTTGGGCAATTGATG 28294 || || |||||| | || | ||||| ||||| ||||| ||||| || || ||| ||||| Sbjct 1426634 CCACAGAAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACTGATG 1426693 Query 28295 AGCGTCAAATTAGCCAATCCGCACTTGAAGGTGCTGGCGTCGATCGGCGGCTGGACGCTG 28354 | | ||| ||||| || || ||||| | || | || |||| || ||||| ||| Sbjct 1426694 ATGTTGAAACAGGCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGTTGGACCCTG 1426753 Query 28355 TCGGACCCATTCTTTCACATGCACGACGCGACCGTGCGCCAAAC--GTTCATCGATTCCG 28412 | || || ||||| | | | || | | | | | || ||| | | ||| | Sbjct 1426754 GCTGATCCCTTCTTCTTCTTCGATGA--CAAAGTTAAGAGAGACCGCTTCGTTGGTTCAG 1426811 Query 28413 TCGTGGACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGACATCGATTGGGAGTTTC 28472 || ||||||| | | ||||||||| |||||||| ||||| || || ||||||||||| | Sbjct 1426812 TCAAGGACTTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGGAGTTCC 1426871 Query 28473 CGGGCGGCAAAGGAGCCAATCCCGA 28497 | || || || ||||| || || || Sbjct 1426872 CTGGAGGTAAGGGAGCTAACCCTGA 1426896 >seq4 Length=2913607 Score = 114 bits (126), Expect = 1e-20 Identities = 112/142 (79%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 57301 GCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCG 57360 ||||| | |||||| | || |||||||| ||||||| ||||| ||| | ||||| || Sbjct 2347997 GCCTCAATGTTGCCGAGATCACCGACGTGACGCACGGACGCGTCGGGGCCACCGTGCTC- 2347939 Query 57361 CTGCCGGTG-GGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 |||| | |||||||||||| |||| ||||| ||||||||||| || |||| ||||| Sbjct 2347938 CTGCTTCAGCGGGTTAAAGTGCGCGCCGGCCGATGTGCAGCCGTTTGTGTTGTCACCGAA 2347879 Query 57420 CTCGTGAACGTGAAATCCGTGC 57441 ||| || ||||| || |||||| Sbjct 2347878 CTCATGCACGTGGAAACCGTGC 2347857 >seq36 Length=1647457 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| | ||||| ||||| || ||||| |||| Sbjct 455341 TTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTCAAGCTGTTTGCCGG 455282 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| | |||||||||||| || || || ||||||||||| ||| || |||| Sbjct 455281 CGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTTA 455222 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | ||| | ||||| | | ||| ||||| | || | ||||| ||||| || || | Sbjct 455221 CATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTGTTTTGCCAGTAAGGGTCT 455162 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 455161 TGACAAAGATCTGCAT 455146 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | ||||| || ||||||||||| || || ||| || |||||| Sbjct 937309 ACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTGCGGCCGTCCTCA 937368 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 || ||||| |||| | |||| || ||||| || || ||||| || ||||| || || | Sbjct 937369 AGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGG 937428 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| ||| | | || | ||||| | | ||||| || | || | ||||| Sbjct 937429 ATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAGTGTGATTGTTTTG 937488 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || || |||||||| ||||| Sbjct 937489 CCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | || ||||||||||||||||| || Sbjct 455600 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455541 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || ||||| |||| | |||| | ||||| ||||| || || Sbjct 455540 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGA 455481 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 455480 ATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACC 455421 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || || ||||| ||||| |||||||| Sbjct 455420 TCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || ||||| || || | || || ||| || | ||| || || | Sbjct 455113 TTGACTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCGTCTTCTAATTGCTTTCCAG 455054 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || ||||| || || || || |||||||| || || ||| |||| | ||| Sbjct 455053 CAAAGATCAGTCGCTGCTGATCTGGGGGAATACCTTCCTTATCT-TGAATTTTAGCTTTG 454995 Query 138539 ATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||||| | || ||| || |||| || | ||||||||||||| ||| Sbjct 454994 ACGTTCTCAATAGTGTCTGACGGCTCAACTTCGAGAGTGATGGTTTTACCAGTCAAGGTT 454935 Query 138598 TTTACAAAAATCTGCATGGCTTAT 138621 ||||| ||||||||||| ||||| Sbjct 454934 TTTACGAAAATCTGCAT--CTTAT 454913 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| ||||| || | Sbjct 456248 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCG 456189 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || ||||||||||| ||| ||| |||| Sbjct 456188 AAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTTACA 456129 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| || || | || | ||||| ||||| || || || Sbjct 456128 TTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTGCCAGTAAGGGTCTTG 456069 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 456068 ACAAAGATCTGCAT 456055 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||||||||| | ||| ||| || || | || || |||| | Sbjct 937552 GATTCCTTCTGAATGTTGTAGTCTGATAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCA 937611 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||| || || ||||| || ||||||||||| |||||| || | Sbjct 937612 AAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTCACA 937671 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | ||||| | | ||| || || | || | ||||| ||||| | ||| ||| Sbjct 937672 TTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTT 937731 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 937732 ACGAAGATCTGCAT 937745 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | || ||||||||||||||||| || Sbjct 455828 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455769 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| ||||| |||| |||| | ||||| ||||| || || Sbjct 455768 AGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455709 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || |||| | || | ||||| | | ||||| Sbjct 455708 ATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACT 455649 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| |||||||| || || |||||||| Sbjct 455648 TCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||| || || ||||||||||| | || || ||||| || ||||| |||| Sbjct 456022 TTGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATCCTCAAGCTGTTTGCCGG 455963 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| | ||||| ||||| || || || ||||||||||| ||| ||| |||| Sbjct 455962 CGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTTA 455903 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 ||| | | ||||| | | ||||| || | || | ||||| ||||| |||||| Sbjct 455902 CATT----CTCAGTGTCAGATGGTTCCACTTCCAGTGTAATTGTTTTTCCAGTGAGAGTT 455847 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 455846 TTAACGAAGATCTGCAT 455830 >seq116 Length=882076 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/122 (79%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 124741 GGCTTCTACTACAT-GGGCGTCGGCGACGAAGTGCGTTGCGCTTTCTGCAAAGTCGAAAT 124799 || ||||||||| | ||||| ||| || ||||| || || || ||||| ||||| ||||| Sbjct 457605 GGTTTCTACTACCTTGGGCG-CGGTGATGAAGTTCGCTGTGCATTCTGTAAAGTAGAAAT 457663 Query 124800 TATGCGATGGCAGCCCGGCGACGATCC-GCTAACGGACCACAAACGATGGGCGCCTCAGT 124858 |||||||||| | || ||||| || || || || ||||||||||||||||| || | Sbjct 457664 TATGCGATGGGCGGAAGGAGACGACCCTGCGAA-AGATCACAAACGATGGGCGCCCCAAT 457722 Query 124859 GT 124860 || Sbjct 457723 GT 457724 >seq158 Length=707457 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || || ||||| || || |||||| || || | || || |||| Sbjct 607270 GATTCTTTCTGGATATTGTAATCAGACAGAGTACGGCCATCTTCCAACTGCTTGCCGGCG 607211 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| ||||||||||| || ||| || || | Sbjct 607210 AAGATGAGTCGCTGTTGGTCCGGAGGGATACCTTCTTTATCTTGGATCTTAGCCTTCACA 607151 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | |||||| | | ||||||||| | || | || || || || || ||||| Sbjct 607150 TTTTCGATGGTGTCTGAAGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTG 607091 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 607090 ACGAATATCTGCAT 607077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496132931343120