Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq36 95.1 9e-15 >seq36 Length=1647457 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || || || ||||| || || ||||| ||||||||||| Sbjct 455600 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455541 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | |||||||| || | ||||| ||||| ||||| ||| Sbjct 455540 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGA 455481 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||| ||||| || ||||| || ||| | || ||||| || | || || Sbjct 455480 ATGCCTTCTTTGTCTTGGATCTTTGCCTTA-ACATTCTCGATAGTGTCTGAAGGCTCAAC 455422 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| |||||||||||||| || ||||| ||||| || |||||| Sbjct 455421 CTCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCATA 455373 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || || || ||||| ||||| ||| | | ||||||||||||| Sbjct 455120 TGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCGTCTTCTAATTGC 455061 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | |||| ||||| || || ||||| |||||||| || |||||| Sbjct 455060 TTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGAATTTTA 455001 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| || | || ||||| || || || || | || ||||||||||| ||| Sbjct 455000 GCTTTGACGTTCTCAATAGTGTCTGACGGCTCAACTTCGAGAGTGATGGTTTTACCAGTC 454941 Query 15154 AGAGTTTTTACAAAAATTTGCATATT 15179 | |||||||| ||||| ||||| || Sbjct 454940 AAGGTTTTTACGAAAATCTGCATCTT 454915 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || || || |||||||| ||| || | | | || || | ||| Sbjct 455348 TGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTCAAGCTGT 455289 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | ||||||||||||||||| ||||| ||||| ||||| || ||| Sbjct 455288 TTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTG 455229 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 |||||| |||| ||||| || | || || || | ||| || ||||| || || Sbjct 455228 GCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTGTTTTGCCAGTA 455169 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || |||||| Sbjct 455168 AGGGTCTTGACAAAGATCTGCATA 455145 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | ||| | |||||||| || || || ||||| || ||||||||||| Sbjct 937291 CCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGAC 937350 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | |||| || | ||||| || || | || | ||||| || || ||| Sbjct 937351 AGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGA 937410 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTAT-TTTCTAC 15128 || |||||||| || ||||| ||| ||| | || || || || | || ||| || Sbjct 937411 ATGCCTTCCTTATCCTGGATTTTAGCTTTAACATTCTCAATTGTGTC-CGATGGTTCCAC 937469 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || ||||| || ||||| || || ||||||||||||||| Sbjct 937470 TTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCATA 937518 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || || || ||||| || || ||||| ||||||||||| Sbjct 455828 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455769 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | |||||||| ||| | ||||| ||||| ||||| ||| Sbjct 455768 AGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455709 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || || |||||| | || ||||| || ||| || Sbjct 455708 ATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACT 455649 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| ||||| || || |||||||| || || || |||||| Sbjct 455648 TCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCATA 455601 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| || || || |||||||| ||| ||| | | | || || | ||| Sbjct 456257 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGT 456198 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 ||||||||| | ||||| ||||| ||||| ||||| ||||| ||||| || ||| Sbjct 456197 TTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTT 456138 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || |||||| | || || || || | || || || | ||||| ||||| || || Sbjct 456137 GC-CTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTGCCAGT 456079 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || |||||| Sbjct 456078 AAGGGTCTTGACAAAGATCTGCATA 456054 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 ||| || || | || || |||||||| | ||||| || ||||| || ||||| ||| Sbjct 935535 GCCGCCGCGAAGTCGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGA 935594 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 |||| | | |||| || | || || || || | || | ||||| || || || Sbjct 935595 GAGAGTACGGCCGTCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGG 935654 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| ||||||||||| ||||||| || ||| | || || || || | || || Sbjct 935655 AATGCCTTCCTTGTCCTGAATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCAC 935714 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || |||||||| ||||| || || || || ||||||||| Sbjct 935715 TTCAAGTGTGATCGTTTTACCGGTCAGCGTCTTAACGAATATTTGCATA 935763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357301091872235