Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq158 143 6e-29 seq36 118 2e-21 >seq158 Length=707457 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || ||| || || || | ||| ||||| || || || |||| ||||| |||| || ||| Sbjct 607298 TCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGT 607239 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||| |||||| |||||||||||||| ||||| ||||||||| || || Sbjct 607238 ACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAGGGATACC 607179 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || ||||| |||||| ||||| |||||||| | || || || | Sbjct 607178 TTCTTTATCTTGGATCTTAGCCTTCACATTTTCGATGGTGTCTGAAGCCTCCACCTCAAG 607119 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || ||||| || || || || Sbjct 607118 GGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCTG 607080 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| ||||||||||| ||||||||||||||||| | ||| || | |||||||| |||| Sbjct 607202 ACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTACAATATCCA 607261 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 |||||| || ||||||||| | || | || ||| || Sbjct 607262 GAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTAGA 607298 >seq36 Length=1647457 Score = 118 bits (130), Expect = 2e-21 Identities = 153/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| ||||| || |||| ||||||||| | | || | ||||| Sbjct 456038 AGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATCC 455979 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || ||||||||||| | ||||||||||| || ||| |||||| || Sbjct 455978 TCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 455919 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || |||| | ||||| | || ||| || |||| || || || Sbjct 455918 TGGATCTTTGCCTTTAC--ATTC-TCAGTGTCAGATGGTTCCACTTCCAGTGTAATTGTT 455862 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || || || || Sbjct 455861 TTTCCAGTGAGAGTTTTAACGAAGATCTG 455833 Score = 113 bits (124), Expect = 1e-19 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || || ||||| || | ||||||||| | | ||| | |||||| Sbjct 937534 AGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGATAGAGTGCGCCCATCT 937593 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | |||||||||||| || |||||||||||||| || ||| ||| |||||| || Sbjct 937594 TCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCT 937653 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || |||||| ||| | ||||||| | || || ||||| ||||| || Sbjct 937654 TGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTT 937713 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || | ||| || || || || || |||||| Sbjct 937714 TTCCCAGTTAAAGTCTTTACGAAGATCTG---CATTTT 937748 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| ||||| |||||||| |||| ||||||||| | | || Sbjct 455366 CGAAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTA 455307 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || ||||||||||| | |||||| ||||| || ||| ||| Sbjct 455306 CGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCT 455247 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || ||| | ||||||| | || || || | Sbjct 455246 TCTTTGTCTTGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGG 455187 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || || ||||| || || Sbjct 455186 GTGATTGTTTTGCCAGTAAGGGTCTTGACAAAGATCTG 455149 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| || || | || ||||| ||||| || || | |||||| || | || ||| Sbjct 937297 CGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTG 937356 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||| |||||||| ||||| || |||||||| || ||| ||| ||| Sbjct 937357 CGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCT 937416 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGAT-TCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| || ||| |||| | | || | ||||| | || ||| || |||| Sbjct 937417 TCCTTATCCTGGAT-TTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAG 937475 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || || ||||||||||| Sbjct 937476 TGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTG 937514 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || || |||||||| | |||||| |||| | || | ||||| Sbjct 455585 AGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCC 455526 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || ||||| ||||| | ||||||||||| || ||| |||||| || Sbjct 455525 TCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 455466 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || |||| ||||||| | || || || | ||||| || Sbjct 455465 TGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTT 455406 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| ||||| || || Sbjct 455405 TTACCTGTGAGGGTTTTGACAAAGATCTG 455377 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| ||||| |||||||| |||| ||||||||| | | || Sbjct 456275 CGAAGACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 456216 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || || |||||||| | ||||||||||| || ||| ||| Sbjct 456215 CGGCCATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCT 456156 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || |||||| ||| || || | |||||| | | || || || | Sbjct 456155 TCTTTGTCTTGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGA 456096 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || ||||| || || Sbjct 456095 GTAATAGTTTTGCCAGTAAGGGTCTTGACAAAGATCTG 456058 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || || |||||||| | |||||| |||| | || | ||||| Sbjct 455813 AGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCC 455754 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || ||||||||||| | ||||||||||| || ||| || || || Sbjct 455753 TCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 455694 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | ||||| | || ||| || |||| || || || Sbjct 455693 TGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACTTCCAGTGTAATAGTT 455634 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || || || || Sbjct 455633 TTTCCAGTGAGAGTTTTAACGAAGATCTG 455605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178606344943357