Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq616 114 2e-20 >seq616 Length=113079 Score = 114 bits (126), Expect = 2e-20 Identities = 677/1075 (63%), Gaps = 27/1075 (3%) Strand=Plus/Minus Query 112276 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAG 112335 |||||||||||||| | | | ||| || || || |||||||||||| | || |||| Sbjct 36228 TGTGGAAAGCTATTATAGAAGCACAAGTAGAAACGGGAACACCATATATGTTGTATAAAG 36169 Query 112336 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCT 112395 || | || |||| || ||||| ||||| ||| | || || ||| | ||| | | Sbjct 36168 ACTCGTGCAACCGCAAAAGTAACCAAAAAAATCTAGGAACTATTAAGTGCAGCAATTTGT 36109 Query 112396 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 112455 |||| ||||| |||| | || |||||| ||||| || || | || || | Sbjct 36108 GTACTGAAATAGTGGAGTACACTTCAGCTGATGAGGTTGCTGTTTGCAATTTGGCCTCTA 36049 Query 112456 TCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACG 112515 | || || || || ||| || ||| | || ||| ||| ||| ||||| | | Sbjct 36048 TTGCACTTAACATGTTTGTCAATGAAGATAAAA---CATACAATTTTGATAAACTAAAAG 35992 Query 112516 AAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 112575 ||||||| |||| | ||| | || || || | | ||||||| |||| |||||| | Sbjct 35991 AAGTTACAAAAATCATAACACAGAATCTTAATAAAATTATTGAAGTTAATTATTACCCAG 35932 Query 112576 TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTC 112635 || ||| | ||| |||||||||||| | ||||||||| | || || ||||| Sbjct 35931 TTCCTGAAGCTAAAACATCCAATATGAGACACAGACCAATTGGTATAGGAGTGCAAGGAT 35872 Query 112636 TCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGC---GAAG-GAA 112691 | || || ||| |||||| || ||| ||| || || ||| || Sbjct 35871 TAGCAGACACATTTATTCTTATGCGTATTCCATACGATAGTGAACCGGCCATAAAGCTAA 35812 Query 112692 ATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTG 112751 ||||| | |||||||| ||||| ||| ||| || ||||| || || | | || Sbjct 35811 ATCAA----CAAATATTTGAAACAATTTATTACGGAGCACTTGAAGCAAGCTGTCAATTA 35756 Query 112752 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 112811 || || |||| |||||||| | ||| || ||| || ||||| | | Sbjct 35755 GCCGAAAAATATGGAGTCTATGAAACTTATGAAGGCAGTCCGGCGAGCCAAGGAATTTTA 35696 Query 112812 CAATTTGATATGTGGGAAGGTGAGACCA---AGCTTCACTACGACTGGGACGCTCTCAAG 112868 |||| ||||||| |||| || ||| | ||| | |||||| || | || Sbjct 35695 CAATACGATATGT-GGAATAAGACTCCAACTAACTT--GTGGGACTGGACTGCCTTGAAA 35639 Query 112869 GAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 112926 ||| || ||| | | || ||| | ||| ||||| | || || ||||| |||| Sbjct 35638 GAAAAAATTGCAA--AACATGGCCTTAGAAACTCACTTTTAGTAGCTCCCATGCCCACAG 35581 Query 112927 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCT 112986 | || || || ||||| | || |||||||| | ||||||||| || | || || | Sbjct 35580 CATCTACAGCTCAAATTCTTGGCAATAATGAGTCATTTGAACCCATAACCTCCAATATAT 35521 Query 112987 ATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACC 113046 ||| |||| | || | || || ||| |||| || | ||||| | ||| | Sbjct 35520 ATCAGAGACGCGTTCTATCAGGTGAATTTCAAGTTGTTAATCACCATCTATTACGTGATC 35461 Query 113047 TCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTT 113106 ||| ||| || | ||| | || ||||| | || || | | ||| | Sbjct 35460 TCACAGAAGCTGAATTGTGGGATGAAGACATGAAAAACCTTATCATCCACAACAATGGCT 35401 Query 113107 CCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGG 113166 |||| |||| |||| || ||||| | ||||||| | |||||| || ||||||| Sbjct 35400 CCATACAAAGCATTGAGGTAATTCCTAAAGAAATTAGAGATTTGTACAAAACTGTTTGGG 35341 Query 113167 AAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAA 113226 |||| | ||| ||| | ||||| ||||| | || || || ||||||| Sbjct 35340 AAATTTCTGTTAAGACCACTATTCAAATGGCAGCAGACAGGGGAGCATTTATAGATCAAA 35281 Query 113227 GTCAAAGTATGAATCTATTCA---TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGC 113283 | ||| | || ||||| || | | | || ||| ||||| ||||||| | Sbjct 35280 GCCAATCATTCAA--CATTCATGTTGCAGAACCTAATTATG-GGAAGCTAACTTCTATTC 35224 Query 113284 ACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAA 113338 | | || ||||| | |||| | ||||| || |||||||| || || |||| Sbjct 35223 ATTTTTATTCCTGGAAAATGGGTTTGAAAACAGGAATGTATTATCTACGTACTAA 35169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620580456067120