Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq616 174 2e-38 >seq616 Length=113079 Score = 174 bits (192), Expect = 2e-38 Identities = 489/733 (67%), Gaps = 31/733 (4%) Strand=Plus/Plus Query 105928 TCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGC 105987 |||| |||| || || | || ||||||||| | |||||||| || | ||||| || Sbjct 35513 TCTCTGATATATATTGGAGGTTATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGC 35572 Query 105988 GGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG-- 106045 || || ||||| ||||| || || | ||||| ||| | ||| || | || ||| Sbjct 35573 TGTAGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTTCTAAGGCCATGTT--TTGCA 35630 Query 106046 ATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTGAGCTTGGTTTCACCTTCCCACATA 106102 || ||| || | || |||||| | ||| || |||| || |||| ||||| Sbjct 35631 ATTTTTTCTTTCAAGGCAGTCCAGTCCCACAAGTT-AG-TTGGAGTCTTATTCC-ACATA 35687 Query 106103 TCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG 106162 || |||| | | |||||| || ||| || ||| | || |||||| || | Sbjct 35688 TCGTATTGTAAAATTCCTTGGCTCGCCGGACTGCCTTCATAAGTTTCATAGACTCCATAT 35747 Query 106163 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 106222 ||| || |||| |||||| || || || | | ||| ||| || |||||||| || | Sbjct 35748 TTTTCGGCTAATTGACAGCTTGCTTCAAGTGCTCCGTAATAAATTGTTTCAAATATTTGT 35807 Query 106223 GCATTCATCTCCTTGGC---TTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATAC 106278 ||| | || |||| |||| || ||| ||| | | ||| || ||||||| Sbjct 35808 TGATTTAGCTTTATGGCCGGTTCA-CT--ATCGTATG-GAATACGCATAAGAATAAATGT 35863 Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC--TTTCGC 106336 || || | ||||| || || | |||||| |||||||||| |||||| || ||| || Sbjct 35864 GTCTGCTAATCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATTGGATGTTTTAGC 35923 Query 106337 G-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 ||| ||| || ||| |||| ||||| | | || ||||| | || | || Sbjct 35924 TTCAGG---AACTGGGTAATAATTAACTTCAATAATTTTATTAAGATTCTGTGTTATGAT 35980 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 106455 ||||| | ||| | ||||| ||| ||| | || | |||||||||||| || | Sbjct 35981 TTTTGTAACTTCTTTTAGTTTATCAAAATTGTATGTTTTA---TCTTCATTGACAAACAT 36037 Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC--CTTATCTGTGTACTCT 106513 ||| || || || ||||||||||||||||| |||||| || | |||||||| Sbjct 36038 GTTAAGTGCAATAGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGA--AGTGTACTCC 36095 Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573 | ||||| |||||||| ||| | |||||| || || | ||| ||||||||||| || Sbjct 36096 ACTATTTCAGTACACAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTG 36155 Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGA 106633 |||||||| || || || | ||| || || || ||||| || |||| | | | Sbjct 36156 CGGTTGCACGAGTCTTTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATA 36215 Query 106634 ATTGCCTTCCACA 106646 || || ||||||| Sbjct 36216 ATAGCTTTCCACA 36228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589826881384040