Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq158 168 1e-36 seq36 168 1e-36 >seq158 Length=707457 Score = 168 bits (186), Expect = 1e-36 Identities = 171/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | || | |||||||||||| ||||| || ||||||||||| | ||||| Sbjct 607298 TCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGT 607239 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||| || |||||||| ||||| |||||||| ||||| || || Sbjct 607238 ACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAGGGATACC 607179 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| || || ||| || || || |||||||| ||| ||||| ||||| Sbjct 607178 TTCTTTATCTTGGATCTTAGCCTTCACATTTTCGATGGTGTCTGAAGCCTCCACCTCAAG 607119 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || || | ||||| ||||| | |||||| Sbjct 607118 GGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCTGCATT 607076 >seq36 Length=1647457 Score = 168 bits (186), Expect = 1e-36 Identities = 156/198 (79%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || ||||| |||||||| |||| ||||| | || || |||||||||||||| Sbjct 935565 AGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACC 935624 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || ||||||||||| || || || |||||||||||||| ||||| |||||||| ||| Sbjct 935625 GGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAATTTTGGCCTT 935684 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || |||||||| ||||| ||| ||||||||||| || | ||| || || |||| || Sbjct 935685 AACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGATCGTTTTACCGGTCAGCGT 935744 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 935745 CTTAACGAATATTTGCAT 935762 Score = 163 bits (180), Expect = 6e-35 Identities = 162/209 (78%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| |||||||| || || ||||| || | ||| || | ||||| || Sbjct 456035 ACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATCCTCA 455976 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| | ||| || |||||||| |||||||||||||||||||| Sbjct 455975 AGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGG 455916 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| || |||||| ||||| || ||||||||| || |||| || ||| Sbjct 455915 ATCTTTGCCTTTACATTCTCA---GTGTCAGATGGTTCCACTTCCAGTGTAATTGTTTTT 455859 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | |||||| ||||| | ||||| Sbjct 455858 CCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || ||||| |||| || || | ||||| ||| Sbjct 456263 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 456204 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| | ||| || |||||||| |||||||||||||||||||| Sbjct 456203 AGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGG 456144 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| || |||||||||||||| ||| || |||||||| |||| || || Sbjct 456143 ATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTG 456084 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 456083 CCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||| | || | || |||||||||||||| ||||| |||||||| | ||||| | Sbjct 937299 GAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTGCG 937358 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || || ||||| || || || ||||||||||| || || ||||||||||||||||| Sbjct 937359 GCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCTTC 937418 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || ||||| || || |||||||| |||||||| ||||||||| || || Sbjct 937419 CTTATCCTGGATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAGTGT 937478 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || |||| || || || || | |||||| Sbjct 937479 GATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||| || || ||||| ||||| || | ||||| | ||||||||| | ||| Sbjct 937542 GTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGATAGAGTGCGCCCATCTTCTAACTG 937601 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || || || || || |||||||||||||||||||||||||| ||||| Sbjct 937602 CTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTT 937661 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| ||||| ||| || ||||| | || | || || || || Sbjct 937662 GGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTTTTCCCAGT 937721 Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142 ||||| |||||||| | ||||||| Sbjct 937722 TAAAGTCTTTACGAAGATCTGCATTT 937747 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||| || |||||||| |||||||| | ||| || | ||||| || ||||| Sbjct 455577 GTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCAAGCTG 455518 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | ||| || |||||||| |||||||||||||||||||| || || Sbjct 455517 TTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTT 455458 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| || ||||| || ||||| ||| || || |||||||| | || || ||||| Sbjct 455457 TGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTTACCTGT 455398 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| Sbjct 455397 GAGGGTTTTGACAAAGATCTGCAT 455374 Score = 143 bits (158), Expect = 6e-29 Identities = 161/214 (75%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || || ||||| | || || | || ||||| Sbjct 455126 ACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCGTCTTCT 455067 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || || ||||| ||||| || || ||||| ||||| ||||| || |||||| Sbjct 455066 AATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGA 455007 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||||||||||| ||||| || || ||||| || || | || || Sbjct 455006 ATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAACTTCGAGAGTGATGGTTTTA 454947 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT-TTAT 195144 || ||||| ||||||||||| | ||||| |||| Sbjct 454946 CCAGTCAAGGTTTTTACGAAAATCTGCATCTTAT 454913 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || ||||| |||| ||| || | ||||| || Sbjct 455354 ACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTCA 455295 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| | || ||||||||||| |||||||||||||||||||| Sbjct 455294 AGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGG 455235 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| ||||| ||| || || |||||||| | || || Sbjct 455234 ATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTGTTTTG 455175 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 455174 CCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109184913872057