Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq200 116 7e-21 >seq200 Length=575180 Score = 116 bits (128), Expect = 7e-21 Identities = 122/157 (78%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 25582 CATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAAT 25641 ||||| ||||| | || ||||||||||||| || ||||| ||||| || || || ||| Sbjct 474017 CATTTCATCAAGCATGTACTGGCATTCTTTGCTGCATCTGACGGTATTGTCAATGAAAAT 474076 Query 25642 CTGTGCGAGAGATTCACCAGGGAAGTGC-AGT-ACGTGGAGGCCAAGTGTTTCTACGGTT 25699 || ||||||||| | ||||||| ||| || |||||| | |||||||||||| | Sbjct 474077 CTTGTTGAGAGATTCTCGCAAGAAGTGCAAGTGAC--GGAGGCAAGGTGTTTCTACGGAT 474134 Query 25700 TCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 |||| || ||||| || ||||||||||| ||| |||| Sbjct 474135 TCCAAATAGCCATGGAGAATGTGCACTCAGAGATGTA 474171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928602476002240