Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq44 233 2e-56 seq36 95.1 1e-14 >seq44 Length=1464967 Score = 233 bits (258), Expect = 2e-56 Identities = 528/788 (67%), Gaps = 7/788 (1%) Strand=Plus/Minus Query 106213 GTTGTGTATTTTTCTTCGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAGA 106272 || ||||| | || | || ||||| ||| || |||| || || || | ||| ||| Sbjct 1427181 GTAGTGTAAGTCTCCTTGGGTTTCCACTCAGGAGCGTATAACGAGGTCTGGTGGCCAAGA 1427122 Query 106273 TCTGTG-TTCGACCACGCCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATA 106331 ||| || ||||| || || || || ||||| ||||| | |||||| | ||||| || Sbjct 1427121 G-TGTCATTGGACCAGGCTCCCTTGAAGTCGTAGCTCATCACGAAAATATGGTCCATGTA 1427063 Query 106332 TTTTTGTGCGTCGTTATAGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCT 106391 || || || || || ||||| || || ||| ||||| | || || || || || Sbjct 1427062 GTTCTGGGCTTCCTTGTAGTTGACAACCTGAATCTTGTCCCACCCAGCACTGATGGCAGA 1427003 Query 106392 GGTTAATTCGTAGAATTTGCCCGTTTGCAGTTC-TAATTCGTCTAGCATGGCGCGCAACT 106450 || | ||||| || || || | ||| ||| ||||| | |||| | | || Sbjct 1427002 AGTCAGCTCGTATTTCTTTCCGGTCT-CAGCGGATAACTCGTCCAACATGTGTCTAAGCT 1426944 Query 106451 CTTGCAACAGCACGACATATGTTTCGGCGTCGCGTTCCGCATCGCCCAAAGAAGGATTGG 106510 | | || || || ||| |||| | || || | | | || | ||| || | Sbjct 1426943 CCTTCATGAGTGTCACGTATATTTCACCATC---TTTAGGACCACCAAGGTCAGGGTTAG 1426887 Query 106511 CCCCTTTGCCGCCTGGAAATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTT 106570 | || || || || || || |||||||| ||||| |||||||| || |||||||| | Sbjct 1426886 CTCCCTTACCTCCAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTCCAGGTCT 1426827 Query 106571 GCAAAAATTCCTTTACAGAATTTACAAACACGTTTCTTTTTTCAACGTCATGCATAAAAT 106630 | ||||| ||||| || ||| || || || ||| || | ||||| | || Sbjct 1426826 GTAAAAAGTCCTTGACTGAACCAACGAAGCGGTCTCTCTTAACTTTGTCATCGAAGAAGA 1426767 Query 106631 AGAAGGGGTCTGATAGCGTCCAACCGCCTATAGACGGAAGCACTTTTAAATGCGGATTTG 106690 ||||||| || | || |||||||| || | || ||||| | || | | || || | Sbjct 1426766 AGAAGGGATCAGCCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAGGTCAGGTTTGG 1426707 Query 106691 CCAATTTAGCCGCCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACA 106750 || ||| | ||||| || || || || |||||||||||||| ||||| | || | Sbjct 1426706 CCTGTTTCAACATCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATTCCAGGACGATA 1426647 Query 106751 CGCCTTTTTGCGGCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGG 106810 ||| || || ||||| || | |||||||| |||||||| || || ||||| || || Sbjct 1426646 AGCCCTTCTGTGGCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATACTTTGAAGTCTT 1426587 Query 106811 CGCGCCCTTTGCATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCAT 106870 | || || |||| || ||||| | || ||||| ||| ||| || || | Sbjct 1426586 CCCGACCGCTGCAGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTCCTTCAAACTGT 1426527 Query 106871 CGTTTATTCCATCACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGG 106930 |||| || |||||||||||||| || || || || ||||||||||| || | | |||| Sbjct 1426526 CGTTAATGCCATCACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTGGGTCAGGTTGG 1426467 Query 106931 GCAGCGGGACTTTATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACG 106990 | | || ||||| |||||||| || || || |||||||||||||| || || |||| Sbjct 1426466 GAACGGGAACTTTGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTCTACGAAGTACG 1426407 Query 106991 CGGCGACA 106998 | ||||| Sbjct 1426406 CACCGACA 1426399 >seq36 Length=1647457 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||| ||| || || |||||| Sbjct 455374 ATGCAGATCTTTGTCAAAACCCTCACAGGTAAAACCATCACCCTTGAGGTTGAGCCTTCA 455433 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||| ||| |||||||| || | ||| ||| || Sbjct 455434 GACACTATCGAGAATGTTAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455493 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| || | |||||||| |||||||| | || ||| || | | ||||| ||| Sbjct 455494 CAGCGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCTGATTACAAC 455553 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 |||||||| ||||| || |||||| ||||| Sbjct 455554 ATTCAAAAGGAATCCACCCTGCACTTGGTA 455583 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || || |||||||| || || ||||||||||| || |||| || || Sbjct 454915 AAGATGCAGATTTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCCG 454974 Query 28611 TCAGAGACGGTGGCCGATCTC-AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 ||||| || | | | || |||| |||| || || || || || | ||| ||| Sbjct 454975 TCAGACACTATTGAGAACGTCAAAGCTAAAATTC-AAGATAAGGAAGGTATTCCCCCAGA 455033 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||| ||| |||| |||||||| || || ||||| ||||| || | | ||||| Sbjct 455034 TCAGCAGCGACTGATCTTTGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTA 455093 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||| || || || || ||||| ||| |||| Sbjct 455094 TAACATCCAGAAGGAGTCAACTCTTCACCTGGT 455126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425296591775109