Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq616 179 2e-40 >seq616 Length=113079 Score = 179 bits (198), Expect = 2e-40 Identities = 307/443 (69%), Gaps = 2/443 (0%) Strand=Plus/Plus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 ||| ||| | | |||||||||||| || ||||| | |||||||| | ||||| |||| Sbjct 36365 CTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAAAAGAGTTCTCTAGCTCG 36424 Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 | ||||||||| || ||| ||||| ||||||||||| || |||||||||| ||||| Sbjct 36425 TACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTCGAAAATATCTGCATGCCA 36484 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 |||||| || || | |||||| || | ||| || ||||||||||| ||||| Sbjct 36485 TGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCCCCCTTGATCTACATATCT 36544 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160 ||||| | || | ||| |||||| || || | ||| | || | || ||||| | Sbjct 36545 GGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATTGGAGACACCATTTGTTCC 36604 Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220 | ||| | | ||| | | ||| || |||| |||| | || || || ||||| | Sbjct 36605 AGCAATATAAGTGCCTTTGGCTCTTATGCAGTGAACATGGACTCCAATACCTCCAGCAGA 36664 Query 26221 TTTTGAAATAGCTGCACAAT-CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTT 26279 ||| || || ||||| | || || ||| || | || |||| || |||||| | | Sbjct 36665 TTTAGATATTAAAGCACATTGCTTTAA-TGTGTCATATATGCCTTCAATACTATCATCCT 36723 Query 26280 TCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATG 26339 ||||| | | ||| || || ||||||| || | | | ||| ||| |||||||| Sbjct 36724 TCATTGCAACTAAGAAGCATGAAGATAGCTGTGGTCGTGGCGTTGCTGCTGAAAATAATG 36783 Query 26340 TCGGTGTAGCATGAGTATAATAT 26362 |||| | ||||| ||| ||||| Sbjct 36784 TCGGGCTGGCATGGGTAAAATAT 36806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252975635401325