Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq616 161 1e-34 >seq616 Length=113079 Score = 161 bits (178), Expect = 1e-34 Identities = 500/753 (66%), Gaps = 33/753 (4%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||||| |||||| | || |||| || || ||||||||||||||| | || || || Sbjct 36226 TGGAAAGCTATTATAGAAGCACAAGTAGAAACGGGAACACCATATATGTTGTATAAAGAC 36167 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 | || ||| || ||||||||||| ||| | ||||| || ||| || ||| | || Sbjct 36166 TCGTGCAACCGCAAAAGTAACCAAAAAAATCTAGGAACTATTAAGTGCAGCAATTTGTGT 36107 Query 75998 ACGGAAATTTTAGAGTACACAGATAAG--GATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 || ||||| | |||||||| | || |||||| ||||||||||||||||| || | Sbjct 36106 ACTGAAATAGTGGAGTACACT--TCAGCTGATGAGGTTGCTGTTTGCAATTTGGCCTCTA 36049 Query 76056 TCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATG 76115 | || ||| | || |||||||||||| | || | ||| ||| ||||| | | Sbjct 36048 TTGCACTTAACATGTTTGTCAATGAAGA---TAAAACATACAATTTTGATAAACTAAAAG 35992 Query 76116 AAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCG 76175 || | ||||| || | || | ||||| || | | ||||| |||| ||| || | Sbjct 35991 AAGTTACAAAAATCATAACACAGAATCTTAATAAAATTATTGAAGTTAATTATTACCCAG 35932 Query 76176 TTGAGACTG-CGCGAAA--GTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAG 76232 || ||| || ||| || |||||| |||||||||| |||||| | || || |||| Sbjct 35931 TT---CCTGAAGCTAAAACATCCAATATGAGACACAGACCAATTGGTATAGGAGTGCAAG 35875 Query 76233 GTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATGAA---GCCAAG 76288 | | || || ||||||| || ||| | | ||| ||| || |||| |||| Sbjct 35874 GATTAGCAGACACATTTATTCTTATGCGTATTC-CATACGAT--AG-TGAACCGGCCATA 35819 Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348 || | ||| | || |||||||| || ||| ||| | | || || || || ||| || Sbjct 35818 AAGCTAAATCAACAAATATTTGAAACAATTTATTACGGAGCACTTGAAGCAAGCTGTCAA 35759 Query 76349 TTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTG 76408 || || ||| | || |||||| || | ||| || ||| ||| |||||| | Sbjct 35758 TTAGCCGAAAAATATGGAGTCTATGAAACTTATGAAGGCAGTCCGGCGAGCCAAGGAATT 35699 Query 76409 CTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC---TACGACTGGGATGTTCTC 76465 | || | ||||||| |||| || |||| || ||| | |||||| || | Sbjct 35698 TTACAATACGATATGT-GGAATAAGACTCCAA-CT-AACTTGTGGGACTGGACTGCCTTG 35642 Query 76466 AAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523 || ||| || ||| | | || ||| | ||| ||||| | || || ||||| | Sbjct 35641 AAAGAAAAAATTGCAA--AACATGGCCTTAGAAACTCACTTTTAGTAGCTCCCATGCCCA 35584 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA-CCATACACAACAAAC 76582 |||| || || || ||||| | || |||||||| | |||||| ||||| || | || Sbjct 35583 CAGCATCTACAGCTCAAATTCTTGGCAATAATGAGTCATTTGAACCCATA-ACCTCCAAT 35525 Query 76583 ATCTACCTGAGAAGAACCCTCGCAGGTGAGTTT 76615 || || | |||| | || ||||||| ||| Sbjct 35524 ATATATCAGAGACGCGTTCTATCAGGTGAATTT 35492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596413962448480