Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq36 145 2e-29 seq158 118 2e-21 seq116 89.7 1e-12 >seq36 Length=1647457 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | || | ||| | ||| || ||| |||||||| Sbjct 455147 ATACCACCGCGCAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCT 455088 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || || ||||| || ||||||||||| | || ||| ||||| || Sbjct 455087 GAGAGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGG 455028 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| |||||| ||| || || |||| ||||||| || Sbjct 455027 GGAATACCTTCCTTATCTTGAATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCA 454968 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTAT 192541 ||||| ||||| |||||||||||||| || ||||| | || |||||||| |||| Sbjct 454967 ACTTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGCATCTTAT 454913 Score = 107 bits (118), Expect = 4e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | ||||| | ||| || || | || | || ||| || || || ||||| Sbjct 455603 ATACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGA-ATGTTGTAATC 455545 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| | || || |||| || | ||||| || |||||||| |||| ||| || || || Sbjct 455544 AGAAAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGG 455485 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || |||||||| ||||| || || || ||||| |||| ||||| | || Sbjct 455484 GGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTC 455425 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||| || | ||||| | ||| |||||||| Sbjct 455424 AACCTCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 96.9 bits (106), Expect = 7e-15 Identities = 139/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || || |||| || || |||| || || || || || ||||| || | | | Sbjct 937564 ATGTTGTAGTCTGATAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAAATGAGACGC 937623 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || || |||||||| ||||| ||||| || ||||| |||| Sbjct 937624 TGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTG 937683 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| | || ||||| | ||| || ||||| |||||||| || || | || |||||| Sbjct 937684 TCTGAAGGCTCAACTTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGC 937743 Query 192535 ATTTT-ATTAGAAAA 192548 ||||| || ||||| Sbjct 937744 ATTTTGATCTGAAAA 937758 >seq158 Length=707457 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367 |||| |||||||| | | || || || | ||| | ||||| |||||| ||||||| Sbjct 607305 TACCTCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAG 607246 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | | || || |||| ||||| || || || || ||||| | || |||||| || || | Sbjct 607245 ACAGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAG 607186 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || |||||||||||||| || ||| || ||||| || | ||||| | || | Sbjct 607185 GGATACCTTCTTTATCTTGGATCTTAGCCTTCACATTTTCGATGGTGTCTGAAGCCTCCA 607126 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 | || || || ||||| || || |||| ||||| | |||||||||||| Sbjct 607125 CCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCTGCATT 607076 >seq116 Length=882076 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 125553 AAAAGGACAATCTGATGCCCATTTTTTATGATCTTCGCCTGGATCGTCGCCTTCTTTCCA 125612 ||| ||||| | | |||||| ||| ||||||| | || ||||| ||||| ||| Sbjct 457730 AAACGGACATTGGGGCGCCCATCGTTTGTGATCTTTCGCAGGGTCGTCTCCTTCCGCCCA 457671 Query 125613 TTGCATTATTTCTACTTTGCAGAAAGCGCATCTTACTTCGTCACCTCTTTGAAGATAATA 125672 | |||| ||||||||||| ||||| || || | ||||| ||||| | ||| || || Sbjct 457670 TCGCATAATTTCTACTTTACAGAATGCACAGCGAACTTCATCACCGCGCCCAAGGTAGTA 457611 Query 125673 GAAACCATTTTTAGCCAACGTTTCAGGCGAAAGAAACGTTAATGGCCAATTAGTAAATGT 125732 ||||||||| ||| ||| |||||| | | |||| ||||| ||| || || Sbjct 457610 GAAACCATTACGAGCTAACTCTTCAGGTGTCACGTACGTGCTAGGCCACTTATCGAAAGT 457551 Query 125733 TTTTATTCGTTC 125744 ||| | |||||| Sbjct 457550 TTTCAGTCGTTC 457539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984216740510850