Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq616 178 4e-39 seq2 95.1 4e-14 >seq616 Length=113079 Score = 178 bits (196), Expect = 4e-39 Identities = 634/982 (65%), Gaps = 17/982 (2%) Strand=Plus/Plus Query 155399 AAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCT 155458 ||||||||| ||||| || || ||||| ||||| | ||| | || || |||| | Sbjct 35858 AAATGTGTCTGCTAATCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATTGGATGT 35917 Query 155459 GCTTGTCTTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATT---TGTAA 155514 | | |||| | ||||||| |||| || |||||||| ||||| | ||| ||| | Sbjct 35918 TTTAG-CTTCAGGAACTGGGTAATAATTAACTTCAATAATTTTATTAAGATTCTGTGTTA 35976 Query 155515 CCAATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAA 155574 | | || || || ||| || ||| || | | |||||||||| ||||| |||| Sbjct 35977 TGATT---TTTGTAACTTCTTTTAGTTTATCAAAATTGTATGTTTTATCTTCATTGACAA 36033 Query 155575 ACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATT 155634 |||| ||| ||||||| |||| ||| || || ||| ||| | | |||| | Sbjct 36034 ACATGTTAAGTGCAATAGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACT 36093 Query 155635 CTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATT 155694 | || || ||| |||| || | ||| || || |||| ||| || |||||| || Sbjct 36094 CCACTATTTCAGTACACAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTT 36153 Query 155695 TACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754 | | ||| || | || || || | || ||||| ||||| || || | ||||| || | Sbjct 36154 TGCGGTTGCACGAGTCTTTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTA 36213 Query 155755 GAAT--CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTC 155812 ||| |||| ||||| | | || |||| |||||| ||| ||| || Sbjct 36214 TAATAGCTTTCCACAGAG--CCTGAGCTTTAACTTGCTTAACAAATCGATTTTCTTTTTC 36271 Query 155813 ATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCA-CTCAGTCCAGGGCACT 155871 ||||||| | || || | | || || || ||||||| || || || || || | Sbjct 36272 ATATTTCTTGTATAGTGCCTCAAATTCTTCTCCCCAACAATCTGCTAAG-CCTGGACAGT 36330 Query 155872 TATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCAC 155931 || || || | || |||| ||| ||||| ||| | | |||||||| |||| Sbjct 36331 CATGAGGACACATAAGACTCCAATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAG 36390 Query 155932 TCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCC 155991 ||| | |||||| || || || || || | || || | ||| ||| || Sbjct 36391 GTATCCATAAAGCATAAAAGAGTTCTCTAGCTCGTACTTCTTCTTTGCCAGTATTTTTTT 36450 Query 155992 GTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTAC 156051 || ||||||||||| |||||| | ||| ||| |||| || | |||||| | Sbjct 36451 TCAGATCTAAGAATTCGAAAATATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTC 36510 Query 156052 CATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCA 156108 || | | ||||| || ||||||||||| | ||||| || || | || | | || Sbjct 36511 CAGGACGTTTATTGCCCCCTTGATCTACATATCTGGCAGTATTGTTATACACTCGCAACA 36570 Query 156109 TAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA 156168 |||| | || |||||||| ||||| ||||| ||||| | || | | | Sbjct 36571 TAGGGACAAGGCCATTGGAGACACCATTTGTTCCAGCAATATAAGTGCCTTTGGCTCTTA 36630 Query 156169 CATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTA 156228 |||| ||| | ||||||||| || | ||||||| ||| ||| |||| ||||| Sbjct 36631 TGCAGTGAACATGGACTCCAATACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTA 36690 Query 156229 CAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA 156288 || | | || ||||||||| |||||| | ||||| | || |||| ||| || Sbjct 36691 ATGTGTCATATATGCCTTCAATACTATCATCCTTCATTGCAACTAAGAAGCATGAAGATA 36750 Query 156289 ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTAT 156348 || |||||||| ||| | || |||| ||| || | ||||| ||||||| || | Sbjct 36751 GCTGTGGTCGTGGCGTTGCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTT 36810 Query 156349 TAGACATATAATCGTATGTCTC 156370 |||| ||| ||||| || Sbjct 36811 CCGACAGTAAATTATATGTATC 36832 >seq2 Length=2967957 Score = 95.1 bits (104), Expect = 4e-14 Identities = 82/101 (81%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| | ||| || |||||| |||||||||| ||||| | ||||||||||| Sbjct 2499308 AATTTCTTTTAGACGTGGCACACCAAGGGTTACGTTT---TTGGAGGACACACCAGCAAA 2499364 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAA 301915 ||||||||| ||||| || | ||||||| ||||||||||| Sbjct 2499365 GTGGAAAGTGTTCAGTGTCATCTGAGTAGCTGGCTCACCAA 2499405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471424021715527