Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq200 120 5e-21 seq7511 93.3 7e-13 seq304 86.0 1e-10 >seq200 Length=575180 Score = 120 bits (132), Expect = 5e-21 Identities = 151/205 (74%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 794355 GATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT 794414 |||||| || ||||| ||| || || |||||||| || |||||||| ||||| || || Sbjct 474924 GATCAACTCATTGCTGAAGGTAAGTCCAGGCATGAGTCCACGCTTCTTCAGCCAGAATAT 474865 Query 794415 GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTC 794474 || || || || ||||| || ||||| |||||||||||||| | |||| || ||| Sbjct 474864 GGAGGCAAAGCTTCCAGAGAAGAAAATGCCTTCGACGGCGGCAAAAGCCACGATCCTCTC 474805 Query 794475 GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCT 794534 | | || ||| | || | | | | |||||||| || |||||| |||||||| ||| | Sbjct 474804 GCCGAAGGTGGC--GGTCTTGCTCG-CGATCCACTGCAGCGCCCAGTCTGCCTTCTTCTT 474748 Query 794535 CACCGAGGGCACCGTGTCGATGGCG 794559 ||| | |||| || || |||||| Sbjct 474747 CACACATGGCAAAGTCTCAATGGCG 474723 Score = 96.9 bits (106), Expect = 5e-14 Identities = 95/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 796297 AGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCC--ATA 796354 || || || ||||| ||||||| || || || |||||||||||||||||||||| ||| Sbjct 473525 AGATCAACTTCCTCCACGGTCCAGAAAGAAGCTTCGGCCTTTTTGTACATCTCCCAAATA 473466 Query 796355 TCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCT 796414 || | |||| | |||||||| | |||||||||| ||| ||||| || || || |||| Sbjct 473465 TCAG--GGTATTGAATGGGGAAAATAACAAAGCGACGGGGATTCTCCCGCAGTAGGGGCT 473408 Query 796415 C 796415 | Sbjct 473407 C 473407 >seq7511 Length=1273 Score = 93.3 bits (102), Expect = 7e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 118778 CTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAA 118837 |||||| || |||| |||| ||||| ||||||||||| | | |||| ||| || Sbjct 1070 CTTGCTAAGACCGAGGATCTTGCCCTGCGGCAGGTAGCCGATGGAGACCTTCCCGTAGAA 1011 Query 118838 GGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTC 118897 |||| |||||||||||||||||||||||| | |||||||| ||| ||||||||| Sbjct 1010 CGGCACCAGATGGTGCTCGCACATGGAGAACATCTCAATGTCCTTCACCACCACCATCTC 951 Query 118898 G 118898 | Sbjct 950 G 950 >seq304 Length=382859 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 291868 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 291809 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 291808 CTCACCCGGGGCATATC 291792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914026256537369