Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq44 141 6e-29 seq36 114 8e-21 seq158 107 1e-18 seq175 82.4 5e-11 >seq44 Length=1464967 Score = 141 bits (156), Expect = 6e-29 Identities = 642/1002 (64%), Gaps = 23/1002 (2%) Strand=Plus/Minus Query 5560 CTGTAATCCACCACACCGTCTTCCCAAGTGCCTGCAATCTTGTCGGTC-GCCACACCGGT 5618 ||||| || ||||| ||||| | |||||| ||| || | | | || || || || || Sbjct 1427361 CTGTAGTCGACCACTCCGTCCTGCCAAGTACCTTTAA-CAGGGCCATCAGCTACTCCTGT 1427303 Query 5619 GAATACATTGTTGTTCACCTGGTCGTGCACTCCGGACCACCCACGACCGTACATGGCTAC 5678 ||| | | || | | ||| || ||||| | ||| |||||||||||||| || || Sbjct 1427302 GAAGGGGATATCGTCCTTGTAGTCATGGACTCCAGTCCATCCACGACCGTACATAGCAAC 1427243 Query 5679 TCCCACAATTAGCTTCCTCGACTCGACGCTCTGATTTAGCAGACGCCTGACGGAAAAATC 5738 || || | |||||| | | || || | |||| | ||| ||| | ||| || Sbjct 1427242 ACCGACGACCAGCTTCTTGGGCTGCACTCCCTGAGCCAAAAGATACCTAATACCAAAGTC 1427183 Query 5739 GGTCGTGTACGTTTCGCCTGGG-TTCCACGATGGAGCGAACAGAGGTGTCTGGTGTCCCA 5797 || ||||| || || | |||| |||||| |||||| | | | |||||||| || | Sbjct 1427182 AGTAGTGTAAGTCTC-CTTGGGTTTCCACTCAGGAGCGTATAACGAGGTCTGGTGGCCAA 1427124 Query 5798 GATCCGTCA-ACGACCAGGCACCCTTGTAATCGTACGTCATGACAAATATGTGATCAAGG 5856 || |||| |||||||| |||||| | ||||| |||| || || || || || | | Sbjct 1427123 GA-GTGTCATTGGACCAGGCTCCCTTGAAGTCGTAGCTCATCACGAAAATATGGTCCATG 1427065 Query 5857 TATTTTTGTGCGGTGGCGTAGTCGACGACGTCGATCTTGTCGTGTCCCGCGCCGACGGCG 5916 || || || || ||||| ||| || | |||||||| || || | || ||| Sbjct 1427064 TAGTTCTGGGCTTCCTTGTAGTTGACAACCTGAATCTTGTCCCACCCAGCACTGATGGCA 1427005 Query 5917 CTCGTCAACT-GTAGCCGTCTACCCCG-CTTCTCGCCCAACTCATCAAGCATCACGCGAA 5974 |||| || ||| ||| || | || || ||||| || | ||| | || Sbjct 1427004 GAAGTCAGCTCGTA--TTTCTTTCCGGTCTCAGCGGATAACTCGTCCAACATGTGTCTAA 1426947 Query 5975 GTTCCCGCAGCAAAAGAGTGT-AGGTGT-TGCGATCCACCTCGGCATTACCCAACACAGA 6032 | ||| | | |||||| | || | | | | | | | | ||| | ||| Sbjct 1426946 GCTCCTTC-----ATGAGTGTCACGTATATTTCACCATCTTTAGGACCACCAAGGTCAGG 1426892 Query 6033 ATTGGCACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCA 6092 || || ||||| || || || |||||||| || || || || || || ||||| ||||| Sbjct 1426891 GTTAGCTCCCTTACCTCCAGGGAACTCCCAATCAATATCAACGCCATCGAAGAATTTCCA 1426832 Query 6093 GGTCTCCAGAAACTCGCGGACGCTTGTGACGAACACCTCACGCTTA---GAGTCATCGTT 6149 ||||| | ||| || ||| ||||| || | |||| ||||||| Sbjct 1426831 GGTCTGTAAAAAGTCCTTGACTGAACCAACGAAGCGGTCTCTCTTAACTTTGTCATCG-- 1426774 Query 6150 CATGAAATAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGA 6209 | ||| | || ||||| || ||||| || || | || || || | | ||| Sbjct 1426773 -AAGAAGAAGAAGGGATCAGCCAGGGTCCAACCACCGACTGAAGGAAGAATCTTCAGGTC 1426715 Query 6210 GGGGTTGTGACGTTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTA 6269 || ||| |||| | |||||| || || || || |||||||| || || | Sbjct 1426714 AGGTTTGGCCTGTTTCAACATCATCAGTTGACCGAAATTGCCCTTGTAAGGCTCATTCCA 1426655 Query 6270 CGCCTCAACACCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTT 6329 | | | || |||||||| |||||||| || ||||| ||||| || ||| || Sbjct 1426654 GGACGATAAGCCCTTCTGTGGCTTTTGCAAAGCAGCCCAAGGATCGTGGATGGATACTTT 1426595 Query 6330 GAAGTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAGGAATTGGGAATCTGCTT 6389 |||||| || ||||| |||||| || || || | || | ||| | ||| Sbjct 1426594 GAAGTCTTCCCGACCGCTGCAGGAGCGTTGCAGTGCTTGGAAACTACCCTCAATTTCCTT 1426535 Query 6390 GAGGGCGTCGTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGT 6449 | |||||| ||||| ||| || ||||| || ||||| ||||||| | ||| || Sbjct 1426534 CAAACTGTCGTTAATGCCATCACCGCCGCAAATCGGGATGAAGCCGTACAATAAGTGGGT 1426475 Query 6450 CAGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCAC 6509 ||| || || | || || ||||| | ||| |||| || ||||| ||||| || || Sbjct 1426474 CAGGTTGGGAACGGGAACTTTGTCTACGGGGAACTTTCGCGGGTACACGCCCCATTCTAC 1426415 Query 6510 GAAATACGCACCGACGACTCGATCGGTTGTCCTCCTGAATGG 6551 ||| ||||||||||| ||| | | | ||| | ||||||| Sbjct 1426414 GAAGTACGCACCGACAACTTTACCAGAGGTCTGCTTGAATGG 1426373 >seq36 Length=1647457 Score = 114 bits (126), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| || ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 456266 AGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 456207 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || |||||||||| ||| ||||||||| | || | || || ||||| Sbjct 456206 TCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 456147 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || ||| || || || || || | ||| | ||| || |||| || || | Sbjct 456146 TGGATCTTTGCCTTTAC--ATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAG 456089 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || || |||||||| |||||||||||||| Sbjct 456088 TTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||| |||||||| || || || ||| |||| |||| Sbjct 455585 AGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCC 455526 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||| ||||||| ||| ||||||||| | || | || || ||||| Sbjct 455525 TCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 455466 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || ||| || || || || || | || | ||| || |||| ||| |||| Sbjct 455465 TGGATCTTTGCCTTAAC--ATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGG 455408 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || |||||||| || |||||||||||||| Sbjct 455407 TTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| || ||||||||| |||||||| || || ||| |||| | || Sbjct 455129 AGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCGTCT 455070 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||||||||| || ||||||||||| ||||| ||| | || | || ||||| || Sbjct 455069 TCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGGAATACCTTCCTTATCT 455010 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | || | || | ||| || || | || ||||| Sbjct 455009 TGAATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAACTTCGAGAGTGATGGTT 454950 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||| ||||| || |||||||| Sbjct 454949 TTACCAGTCAAGGTTTTTACGAAAATCTGCAT 454918 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| || ||||||||| ||||| ||||| || ||| | || |||| Sbjct 455357 AGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCC 455298 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||||||||||| || || |||||| | || | || || ||||| Sbjct 455297 TCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCT 455238 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | | || | || | ||| || |||| ||| || || Sbjct 455237 TGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTGTT 455178 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| |||||||||||||| Sbjct 455177 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Score = 102 bits (112), Expect = 5e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||| |||||||| || || || ||| |||| |||| Sbjct 455813 AGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCC 455754 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||||||||||| ||| ||||||||| | || | ||||||||||| Sbjct 455753 TCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 455694 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | ||| | || || || | || || | Sbjct 455693 TGGATCTTAGCCTTTAC--ATTCTCAATAGTGTCAGATGGTTCCACTTCCAGTGTAATAG 455636 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| ||||| || || || ||||||||||| Sbjct 455635 TTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| || ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 456038 AGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATCC 455979 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||||||||||| ||| ||||||||| | || | || || ||||| Sbjct 455978 TCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 455919 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || || || || | ||| | || || || | || || || Sbjct 455918 TGGATCTTTGCCTTTAC--ATTCT-CAGTGTCAGATGGTTCCACTTCCAGTGTAATTGTT 455862 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || ||||||||||| Sbjct 455861 TTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| |||||||||||||| ||||| ||||| ||||| |||| Sbjct 937534 AGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGATAGAGTGCGCCCATCT 937593 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||||||||||| || || || || ||||| ||| | || | || || ||||| Sbjct 937594 TCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCT 937653 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || | | || | || | ||| || || | || || || Sbjct 937654 TGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTT 937713 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||||| ||||||||||| Sbjct 937714 TTCCCAGTTAAAGTCTTTACGAAGATCTGCAT 937745 >seq158 Length=707457 Score = 107 bits (118), Expect = 1e-18 Identities = 174/249 (70%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 34730 CATATGCATATCCAATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTC 34788 |||| || | |||||||||| ||||| || | ||| || |||| ||||| ||| || Sbjct 607325 CATAAACAAAACCAATCATTTACCTCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTC 607266 Query 34789 CTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGAT 34848 ||||| || || || || || || | || |||| |||| ||||| ||||||||||| Sbjct 607265 TTTCTGGATATTGTAATCAGACAGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGAT 607206 Query 34849 CAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGC 34908 ||||| || ||||| | || | || || || || | || || || || | | Sbjct 607205 GAGTCGCTGTTGGTCCGGAGGGATACCTTCTTTATCTTGGATCTTAGCCTTCACATTTTC 607146 Query 34909 TATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAA 34968 || | || ||||| || |||| ||| |||||||| ||||| ||||| || || || Sbjct 607145 GATGGTGTCTGAAGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTGACGAA 607086 Query 34969 GATCTGCAT 34977 |||||||| Sbjct 607085 TATCTGCAT 607077 >seq175 Length=629782 Score = 82.4 bits (90), Expect = 5e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | || ||||| || ||||| | |||| ||||||||| ||||| ||||| ||| Sbjct 292510 CCACCTCGCAGCCTCAACACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAT 292569 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCA 34850 || |||| |||| ||||| || || ||||||||||||| Sbjct 292570 AGCGTGCGGCCATCCTCCAGCTGTTTACCGGCGAAGATCA 292609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325609955049149