Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq36 105 1e-17 seq158 96.9 5e-15 >seq36 Length=1647457 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| || ||||| || ||||| || ||| | || || || | | | Sbjct 937744 TGCAGATCTTCGTAAAGACTTTAACTGGGAAAACTATCACTTTGGAAGTTGAGCCTTCAG 937685 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || ||||| ||| |||||||||||||| || ||||| | Sbjct 937684 ACACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAGC 937625 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| || || || ||||| ||| | || || |||| || || | Sbjct 937624 AGCGTCTCATTTTTGCCGGAAAGCAGTTAGAAGATGGGCGCACTCTATCAGACTACAACA 937565 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 937564 TTCAGAAGGAATCCAC 937549 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | || || | || || ||||| || || |||| || || | | | Sbjct 935761 TGCAAATATTCGTTAAGACGCTGACCGGTAAAACGATCACACTTGAAGTGGAGCCTTCTG 935702 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||||| || || ||||||||||| || ||||| | Sbjct 935701 ACACAATTGAGAATGTTAAGGCCAAAATTCAGGACAAGGAAGGCATTCCTCCGGATCAGC 935642 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||| || ||||| ||||| || | || || | || | | || || |||| Sbjct 935641 AGCGACTTATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAATA 935582 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | ||||| ||||| ||| | ||||||||| ||||| Sbjct 935581 TCCAAAAGGAATCTACTTTGCATTTAGTACTACGA 935547 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || |||||||| || | || || |||| | Sbjct 937516 TGCAAATTTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGAACCATCGG 937457 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| |||||| || ||| ||||||||||| || ||||| | Sbjct 937456 ACACAATTGAGAATGTTAAAGCTAAAATCCAGGATAAGGAAGGCATTCCTCCAGATCAGC 937397 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||| || ||||| || ||||| | || || | || | ||||||| || | Sbjct 937396 AGCGACTTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTACAACA 937337 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | || ||||| || ||| | ||||||||| Sbjct 937336 TTCAGAAAGAGTCCACTCTGCATTTAGTA 937308 >seq158 Length=707457 Score = 96.9 bits (106), Expect = 5e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | ||||| |||| || || || || || |||| || || | | Sbjct 607078 TGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGCTTCAG 607137 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || ||| || ||| ||||||||| || || || || |||| Sbjct 607138 ACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGACCAAC 607197 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||||| || || || || || || || ||| | || | | ||||| |||| Sbjct 607198 AGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTACAATA 607257 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA-TTACGATTAAGAGGAGGTAAAT 146262 | || |||||||| ||| | || || || ||| | ||| |||||||||||| Sbjct 607258 TCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTA-GAGGAGGTAAAT 607308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785961299013320