Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq44 174 1e-38 seq36 167 2e-36 seq158 111 1e-19 >seq44 Length=1464967 Score = 174 bits (192), Expect = 1e-38 Identities = 348/514 (68%), Gaps = 10/514 (2%) Strand=Plus/Plus Query 45091 ACCACTGACAAAACTGTCGCCGCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTT 45150 ||| ||| ||| ||||| || || ||||| |||||||| ||||| ||| || || Sbjct 1426385 ACCTCTGGTAAAGTTGTCGGTGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTC 1426444 Query 45151 CCTATGAACCGCGTGCCAGTGCCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATA 45210 || | || || || || || ||||| || || || || ||||| || || || || Sbjct 1426445 CCCGTAGACAAAGTTCCCGTTCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATT 1426504 Query 45211 TGCGGTGGCGATGGCATTAATGACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTG 45270 ||||| || ||||||||||| |||||| | || ||| || ||||| |||| || Sbjct 1426505 TGCGGCGGTGATGGCATTAACGACAGTTTGAAGGAAATTGAGGGTAGTTTCCAAGCACTG 1426564 Query 45271 CAAAAATCGTGCGCCGGCCGCTCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCT 45330 ||| || ||| ||| || ||| |||||||| ||| ||||| || ||||| ||| Sbjct 1426565 CAACGCTCCTGCAGCGGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCT 1426624 Query 45331 GTGCAAAAACCACAAAAAGGCGTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGA 45390 ||||||| ||||| || ||| | || | ||||| || || || || |||||||| || Sbjct 1426625 TTGCAAAAGCCACAGAAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGT 1426684 Query 45391 CAAATCATGGCTGTAAAACGGGCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGC 45450 ||| | ||| | |||| ||| || ||| | | || | | || || | || || Sbjct 1426685 CAACTGATGATGTTGAAACAGGCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGT 1426744 Query 45451 TGGACGCTGTCCGATCCGTTTTACCATTTGCACGA-----TGCGGAGAAACGCGCTTTGT 45505 ||||| ||| | ||||| || | | || | || | |||| || ||||| || Sbjct 1426745 TGGACCCTGGCTGATCCCTTCTTCTTCTTCGATGACAAAGTTAAGAGAGAC-CGCTTCGT 1426803 Query 45506 TTGTGGAATCCGTGCGCGAATTTTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAG 45565 | || || || || |||||| || |||||||| || || || || ||||| | Sbjct 1426804 TGGT----TCAGTCAAGGACTTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTG 1426859 Query 45566 ATTGGGAGTTTCCCGGCGGCAATGGCGCCAATCC 45599 |||||||||| || || || || || || || || Sbjct 1426860 ATTGGGAGTTCCCTGGAGGTAAGGGAGCTAACCC 1426893 >seq36 Length=1647457 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || ||||| || || |||||||| ||||||||||| ||||| | | Sbjct 455828 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455769 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| ||||| |||||||| || | ||||||| ||||| || || ||| Sbjct 455768 AGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455709 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || || ||| | || | ||||||||| |||| ||| Sbjct 455708 ATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACT 455649 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| ||||| | |||||||| || |||||||| Sbjct 455648 TCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || ||||| || || |||||||| ||||||||||| ||||| | | Sbjct 455600 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455541 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| ||| | ||||||| ||||| || || ||| Sbjct 455540 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGA 455481 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| | || | |||||| ||| | || || Sbjct 455480 ATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACC 455421 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 455420 TCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 Score = 159 bits (176), Expect = 3e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||| ||||| || || || || || ||||| || || | | |||||| Sbjct 456270 ACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 456211 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| ||||||||||| | ||||||| ||||| || || ||||| || ||||| Sbjct 456210 ATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTT 456151 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| || ||| | || | ||||||||| | || ||||||||||| || Sbjct 456150 GTCTTGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAAT 456091 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||||||| | ||| || ||||| |||||||| Sbjct 456090 AGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||| ||||| || || || || || ||||||||||| | Sbjct 455144 CCACCGCGCAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAG 455085 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || | ||| || |||||| | |||| || |||||||| || ||| Sbjct 455084 AGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGGA 455025 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || ||||| |||||| | |||||| | || | |||||| || | || || Sbjct 455024 ATACCTTCCTTATCTTG-AATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAAC 454966 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 ||| ||||| || ||||| ||||| |||||||| || || |||||||| ||| Sbjct 454965 TTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGCATCTTA 454914 Score = 147 bits (162), Expect = 2e-30 Identities = 170/227 (75%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||| ||||| || || ||||| || ||||| || || | | Sbjct 456053 CCACCACGCAGACGGAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAA 455994 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| || | ||||||| ||||| || || ||| Sbjct 455993 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455934 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| |||| |||||||||| |||| ||| Sbjct 455933 ATGCCTTCTTTGTCTTGGATCTTTGCCTTTACA--TTCT-CAGTGTCAGATGGTTCCACT 455877 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| ||||| | |||||||| || |||||||| Sbjct 455876 TCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 141 bits (156), Expect = 7e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| ||||| |||||||| || |||||||| || || | | ||||| | Sbjct 937531 CGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGATAGAGTGCGCCCA 937590 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || ||| | || | | |||||||| || ||||| || |||||| Sbjct 937591 TCTTCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTG 937650 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| |||| | |||||| ||| | || ||||| | ||| ||| Sbjct 937651 TCTTGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATA 937710 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| |||||||| || || || || ||||||||||| Sbjct 937711 GTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCATTTT 937748 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||| ||||| || || || || || ||||| || || | || ||| || Sbjct 455361 ACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCC 455302 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||| || | ||||| | || || || || ||||| || ||||| Sbjct 455301 ATCCTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTT 455242 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || || ||| |||| | |||||| ||| | || || ||||| || || Sbjct 455241 GTCTTGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGAT 455182 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||| | ||| || ||||| |||||||| Sbjct 455181 TGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || ||||| || ||||| ||||| |||||||| ||||| | | ||||| || Sbjct 937306 AGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTGCGGCCGTCC 937365 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||| || ||| | || | || |||||||| || ||||| || || || || Sbjct 937366 TCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCTTCCTTATCC 937425 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| ||| | || | ||||| || |||| ||||| || || || ||| Sbjct 937426 TGGATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAGTGTGATTGTT 937485 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| | || || ||||| || ||||| Sbjct 937486 TTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || ||||| | || ||||| ||||| || || || || | | || || Sbjct 935548 CGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCG 935607 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || || || ||| | || | || ||||||||||| ||||| || || ||| Sbjct 935608 TCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTG 935667 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || |||||| | || ||| | || | ||||||||| | || |||||||| || || Sbjct 935668 TCCTG-AATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGAT 935726 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | || ||||| ||||| ||||| Sbjct 935727 CGTTTTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 >seq158 Length=707457 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| || ||||| || | | |||||||| ||||| ||||||||||| || || || | Sbjct 607311 ATCATTTACCTCCTCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGT 607252 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 |||| | | || || ||| || | || ||||| || | || | || || || | Sbjct 607251 AATCAGACAGAGTACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGT 607192 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAA 29731 |||| || ||||| ||||| ||||| | || || ||| |||| | ||||| ||| Sbjct 607191 CCGGAGGGATACCTTCTTTATCTTGGATCTTAGCCTTCACATTTTCGATGGTGTCTGAAG 607132 Query 29732 GTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || ||||| || || || || || |||| |||||| || |||||||||||| Sbjct 607131 CCTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTGACGAATATCTGCATT 607076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385121213597811