Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq36 129 4e-25 >seq36 Length=1647457 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || ||| || ||||| ||||||||||| || Sbjct 455601 ACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGA 455542 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | ||||| |||||||| ||||| |||||||| ||| | || Sbjct 455541 AAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGG 455482 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || || | ||||| || | ||||| | || | Sbjct 455481 AATGCCTTCTTTGTCTTGGATCTT-TGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAA 455423 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| ||||||||||| | ||||| ||||||||||||||| Sbjct 455422 CCTCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACAAAGATCTGCATA 455373 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| ||| || || ||||| ||||| || Sbjct 455145 ACCACCGCGCAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGA 455086 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || ||||| ||||| ||||| |||| |||||||||||| | || Sbjct 455085 GAGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGG 455026 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || |||||| | || || | || | ||||| | || | Sbjct 455025 AATACCTTCCTTATCTTGAATTTT-AGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAA 454967 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| |||||||| || || |||||||| || |||||||| Sbjct 454966 CTTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGCAT 454918 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 || ||||| |||||| |||||| || ||||||||||| || || ||||| |||| || Sbjct 937309 ACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTGCGGCCGTCCTCA 937368 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | |||||||||||||| || | |||||||||||| | || | ||||| || || Sbjct 937369 AGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGG 937428 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| | || ||||| || | ||||| || |||||| || | ||||| ||||| Sbjct 937429 ATTTT-AGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAGTGTGATTGTTTT 937487 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||| || ||||| || |||||| Sbjct 937488 GCCAGTCAGCGTCTTGACAAAAATTTGCATA 937518 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| |||||| || |||||||| || || Sbjct 456054 ACCACCACGCAGACGGAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGA 455995 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | ||||| ||||| || ||||| |||||||| ||| | || Sbjct 455994 AAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 455935 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || || | |||| || | ||||| || |||||| Sbjct 455934 AATGCCTTCTTTGTCTTGGATCTT-TGCCTTTACAT--TCTCAGTGTCAGATGGTTCCAC 455878 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || ||||| || || | ||||| || |||||||||||| Sbjct 455877 TTCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCATA 455829 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || | |||||| || || ||| || || || |||||||| || || Sbjct 937518 ACCACCGCGGAGGCGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGA 937577 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || || || |||||||||||||| | ||||||||||||| | || Sbjct 937578 TAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGG 937637 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| ||| |||| || | ||||| | || | Sbjct 937638 AATGCCTTCTTTGTCTTGGATTTTGGCCTTC-ACATTTTCAATAGTGTCTGAAGGCTCAA 937696 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || ||||| || ||||| ||||||||||| Sbjct 937697 CTTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCAT 937745 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || ||||| ||| || || |||||||| |||||| Sbjct 456281 CCACCGCGAAGACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 456222 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||||| || || || ||||| |||||||| ||| | || Sbjct 456221 AGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 456162 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || || | |||| || | |||||| | || || Sbjct 456161 ATGCCTTCTTTGTCTTGGATCTT-TGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAAC 456103 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || ||||| || || | || || ||||||||||||||| Sbjct 456102 TTCAAGAGTAATAGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCATA 456054 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || ||| || ||||| ||||||||||| || Sbjct 455829 ACCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGA 455770 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | ||||| ||||| || ||||| |||||||| ||| | || Sbjct 455769 AAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 455710 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || | | |||| || | ||||| || ||||| Sbjct 455709 AATGCCCTCCTTGTCTTGGATCTT-AGCCTTTACATTCTCAATAGTGTCAGATGGTTCCA 455651 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || ||||| || || | ||||| || |||||||||||| Sbjct 455650 CTTCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCATA 455601 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 |||| || ||||| | ||| || ||||| || ||||| |||||||| || || || Sbjct 935548 CGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCG 935607 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || |||||||| || | ||||||||||| | || | ||||| ||| Sbjct 935608 TCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTG 935667 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || |||||| | | ||||| || | ||||| | ||||| |||| ||||| Sbjct 935668 TCCTGAATTTT-GGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGAT 935726 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||||||||| || | ||| || || || || |||||| Sbjct 935727 CGTTTTACCGGTCAGCGTCTTAACGAATATTTGCATA 935763 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| ||| || || |||||||| ||||| Sbjct 455373 ACCACCACGAAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 455314 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||||| ||||| || ||||||||||| || ||| | || Sbjct 455313 AAGGGTACGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGG 455254 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | | |||| || | ||||| | || | Sbjct 455253 AATGCCTTCTTTGTCTTGGATCTT-GGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAA 455195 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| ||||| || || | || || ||||||||||||||| Sbjct 455194 CCTCAAGGGTGATTGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCATA 455145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328620389104320