Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq158 138 3e-27 seq36 132 1e-25 >seq158 Length=707457 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| |||||| || || || || || ||||| | || ||||| ||| ||| Sbjct 607080 CAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGCTTCAGAC 607139 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| ||||| ||||| |||||||| || |||||| || Sbjct 607140 ACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGACCAACAG 607199 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| ||||||||||| ||||||||||||||||| | ||| || | |||||||| || Sbjct 607200 CGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTACAATATC 607259 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||| || ||||||||| | || | || ||| || Sbjct 607260 CAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTAGA 607298 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 || ||| || | || | ||||||||| || |||||||||| ||| || |||| || ||| Sbjct 607298 TCTAAGCCTAAGCACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGT 607239 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||||| |||||| ||||||||||| || || ||||| Sbjct 607238 ACGGCCATCTTCCAACTGCTTGCCGGCGAAGATGAGTCGCTGTTG 607194 >seq36 Length=1647457 Score = 132 bits (146), Expect = 1e-25 Identities = 147/194 (76%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| |||||||| || || ||||||||||| |||||||| | |||| Sbjct 455845 AAAACTCTCACTGGAAAAACAATTACACTGGAAGTGGAACCATCTGACACTGA-GAAT-- 455901 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||| ||||| |||||||| ||| || ||| || || | |||||| Sbjct 455902 GTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAGCAGCGATTGATCTTC 455961 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || ||| | || ||||| | || | | || |||||| ||||||||||||| Sbjct 455962 GCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCAGACTACAACATCCAGAAAGAGTCA 456021 Query 206365 ACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 456022 ACTCTTCACCTGGT 456035 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || ||||| || ||| | ||||| || ||||||| Sbjct 456058 CAGATCTTTGTCAAGACCCTTACTGGCAAAACTATTACTCTTGAAGTTGAGCCTTCTGAC 456117 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || |||||| |||||| ||||| |||||||| ||| || ||| || Sbjct 456118 ACCATTGAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAGCAG 456177 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| || || ||| | || ||||| | || | |||| |||||| || Sbjct 456178 CGATTGATCTTCGCTGGCAAACAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATC 456237 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||||||||||||||| || Sbjct 456238 CAGAAGGAGTCTACTCTTCACCTGGT 456263 Score = 109 bits (120), Expect = 1e-18 Identities = 155/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| ||||| || || ||||| ||||| ||||||||||| || |||||| | Sbjct 937509 TTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGAACCATCGGACACAAT 937450 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 || || ||||| ||| || || || || ||||| ||| || || || ||| Sbjct 937449 TGAGAATGTTAAAGCTAAA-ATCCAGGATAAGGAAGGCATTCCTCCAGATCAGCAGCGAC 937391 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 ||||||| |||||||| ||| | || || || | ||| || | ||||||||| | |||| Sbjct 937390 TTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTACAACATTCAGA 937331 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| ||||| || | || | ||||| || Sbjct 937330 AAGAGTCCACTCTGCATTTAGTACTCAGACTCCG 937297 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || ||||| ||||| | || || || ||| ||| Sbjct 455149 CAGATCTTTGTCAAGACCCTTACTGGCAAAACAATCACCCTTGAGGTTGAGCCTTCAGAC 455208 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| ||||| ||||| |||||||| ||| || ||| || Sbjct 455209 ACTATTGAAAATGTAAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAACAG 455268 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| || ||| | || ||||| | || | |||| |||||| || Sbjct 455269 CGTTTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGTACCCTTTCCGACTACAACATC 455328 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||||||||| || Sbjct 455329 CAGAAGGAGTCAACTCTTCACCTGGT 455354 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || ||||||||||| | |||||||| |||||||||| | || Sbjct 935747 AAGACGCTGACCGGTAAAACGATCACACTTGAAGTGGAGCCTTCTGACACAATTGAGAAT 935688 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || || ||||| ||| ||||| || |||||||||| Sbjct 935687 GTTAAGGCCAAAATTCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGCGACTTATCTTT 935628 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | ||| | |||| ||||| |||| || || ||| Sbjct 935627 GCCGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAATATCCAAAAGGAATCT 935568 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| | || | || | ||||||| Sbjct 935567 ACTTTGCATTTAGTACTACGACTTCG 935542 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||||||||| || ||| ||||| | ||| || ||| Sbjct 937721 ACTGGGAAAACTATCACTTTGGAAGTTGAGCCTTCAGACACTATTGAAAATGTGAAGGCC 937662 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || ||||| |||||||| ||| || || || | || || || ||||||||| Sbjct 937661 AAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAGCAGCGTCTCATTTTTGCCGGAAAG 937602 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||| |||||||| | ||| | | || |||||| | ||||| || || || |||||| Sbjct 937601 CAGTTAGAAGATGGGCGCACTCTATCAGACTACAACATTCAGAAGGAATCCACACTTCAC 937542 Score = 93.3 bits (102), Expect = 1e-13 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||| | ||||| || || ||||| | || Sbjct 454933 AAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCCGTCAGACACTATTGAGAAC 454992 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| || ||||| ||| || || || |||| ||||| Sbjct 454993 GTCAAAGCTAAA-ATTCAAGATAAGGAAGGTATTCCCCCAGATCAGCAGCGACTGATCTT 455051 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||| || ||||| || | || | | ||||| ||| ||||||| ||||| Sbjct 455052 TGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTATAACATCCAGAAGGAGTC 455111 Query 206364 TACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 455112 AACTCTTCACCTGGT 455126 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| |||||||| || || ||||||||||| |||||||| | || Sbjct 455617 AAAACTCTCACTGGAAAAACTATTACACTGGAAGTGGAACCATCTGACACTATTGAGAAT 455676 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| ||||| || || || ||| || ||| || || | |||||| Sbjct 455677 GTAAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATTGATCTTC 455736 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || ||| | || ||||| | || | | ||||||||| | || || || || Sbjct 455737 GCCGGCAAACAGCTCGAGGATGGCCGCACCCTTTCTGATTACAACATTCAAAAGGAATCC 455796 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 455797 ACCCTGCAC 455805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181504769669191