Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq44 255 5e-63 seq616 174 1e-38 seq158 95.1 1e-14 seq4 82.4 7e-11 >seq44 Length=1464967 Score = 255 bits (282), Expect = 5e-63 Identities = 789/1212 (65%), Gaps = 18/1212 (1%) Strand=Plus/Plus Query 59922 TAAAGTCGTTGCCGCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTGTAGA 59981 |||||| || | || || || || |||||||| || || || |||| || || ||||| Sbjct 1426393 TAAAGTTGTCGGTGCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGA 1426452 Query 59982 TCGAGTGCCCACTCCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCGGCGG 60041 ||| ||| ||| || || | || | | ||||| || || ||||| |||||||| Sbjct 1426453 CAAAGTTCCCGTTCCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGG 1426512 Query 60042 CGACGGTATCAACGACAGTCTTAAAACCATAACCGGTAGTTTCGAAGCGCTTCAGCGATC 60101 || || || ||||||||| | || || ||||||||| |||| || || || || Sbjct 1426513 TGATGGCATTAACGACAGTTTGAAGGAAATTGAGGGTAGTTTCCAAGCACTGCAACGCTC 1426572 Query 60102 GTGTTCAGGTCGAGACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCCAGAA 60161 || ||||| || ||||| |||||||| || |||||||| ||||| || | || || Sbjct 1426573 CTGCAGCGGTCGGGAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCAAAA 1426632 Query 60162 ACCCCAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTCGGACAATTAAT 60221 || || || || | | ||||| || || ||||| || |||||||| ||| | || Sbjct 1426633 GCCACAGAAGGGCTTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACTGAT 1426692 Query 60222 GGCAGCCAAACTGGCAAATCCCCACATCAAAGTGTTGCCCTCGATCGGAGGTTGGACTCT 60281 | |||| ||| || || || | || | | || || |||| |||||||| || Sbjct 1426693 GATGTTGAAACAGGCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGTTGGACCCT 1426752 Query 60282 ATCCGATCCGTTCTTTTACTTTCACGATACGGATAAACGAAAGATTTTTGTAGATTCTGT 60341 | ||||| ||||| | ||| | || | | ||| || | || || | ||| || Sbjct 1426753 GGCTGATCCCTTCTTCTTCTTCGATGACAAAGTTAAGAGAGACCGCTTCGTTGGTTCAGT 1426812 Query 60342 CGTGGAGTTTCTACAGACGTGGAAATTTTTCGACGGTGTCGACATCGACTGGGAGTTTCC 60401 | ||| ||| ||||||| |||||||| ||||| || || || || || |||||||| || Sbjct 1426813 CAAGGACTTTTTACAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGGAGTTCCC 1426872 Query 60402 CGGCGGAAAAGGTGCCAATCCCAACGTAGGCGACGCCGAACGCGATCGCGAAACGTACAC 60461 || || || || || || || || | || | | || ||| | |||| ||| Sbjct 1426873 TGGAGGTAAGGGAGCTAACCCTGACCTTGGTGGTCCTAAA---GATGGTGAAATATACGT 1426929 Query 60462 CATTCTGTTGAAAGATTTACGCGAGGCGCTAGATCGATTAACCCTC-GAAAC-GAATCGA 60519 | || |||| || | | | | | || ||| | | || | || || | | || Sbjct 1426930 GACACTCATGAAGGAGCTTAGACACATGTTGGA-CGAGTTATCCGCTGAGACCGGAAAGA 1426988 Query 60520 ACGTACGAGTTGACCAGCGCAATTAGCGCCGGCGATGACAAAATCGCCGTCGTCGACTAC 60579 | |||||| |||| || || || || || ||||| || || ||| ||||| Sbjct 1426989 AA-TACGAGCTGACTTCTGCCATCAGTGCTGGGTGGGACAAGATTCAGGTTGTCAACTAC 1427047 Query 60580 ACCGCTGCTCAAGAATATTTAGATTTAAtttttttGATGACGTACGATTTTAAAGGAGCC 60639 | | || || | || | || ||||| |||||| ||||| || || |||||| Sbjct 1427048 AAGGAAGCCCAGAACTACATGGACCATATTTTCGTGATGAGCTACGACTTCAAGGGAGCC 1427107 Query 60640 TGGTCGAATAACGATCTGGGCTATCAGACTACTCTATACGCTCCTTCGTTTAATCCTAAA 60699 ||||| ||| || ||| ||| | ||||| | ||||||||||| || || || || Sbjct 1427108 TGGTCCAATGACACTCTTGGCCACCAGACCTCGTTATACGCTCCTGAGTGGAAACCCAAG 1427167 Query 60700 GAACATTATACTACCGATTTTGCCGTTCGTGCTCTACTCAAGCAAAAAGTCGAGAATaaa 60759 || ||| ||||| || |||| || | ||| | || ||| || || Sbjct 1427168 GAGACTTACACTACTGACTTTGGTATTAGGTATCTTTTGGCTCAGGGAGTGCAGCCCAAG 1427227 Query 60760 aaaaTTATTGTCGGCGTGGCCATGTACGGTCGCGGCTGGACCGGCGTAAGCGATTTTGTT 60819 || | | ||||| || || ||||||||||| || ||||| || || || | Sbjct 1427228 AAGCTGGTCGTCGGTGTTGCTATGTACGGTCGTGGATGGACTGGAGTCCATGACTACAAG 1427287 Query 60820 GACGATAATAATCCATTTTCCGGAACGGCCAAGGGACCGGTCAAAGGAACATGGGAAGAC 60879 ||||||| || || | ||| || | || || || ||||| || ||| | ||| Sbjct 1427288 GACGATATC---CCCTTCACAGGAGTAGCTGATGGCCCTGTTAAAGGTACTTGGCAGGAC 1427344 Query 60880 GGAGTCGTCGACTATAGAGAGATTTTCAAT--AATTTC--GTCGCCAATAACCCGATGGA 60935 ||||| |||||||| || |||||| |||| |||| | || | || | || || Sbjct 1427345 GGAGTGGTCGACTACAGGGAGATTGCCAATGGAATTGCCAGTGGTCAGTGGACCTATC-- 1427402 Query 60936 ATATTACGATTCCGTTGCAAAAGCGGCGTACGTCTTTAATAACTCGACCGGCGAGCTCAT 60995 | ||||| || || |||| | |||||||| ||| || || || || || | Sbjct 1427403 --ACTACGACAAAGTAGCCCAAGCTCCATACGTCTTCAATCCTTCCACAGGAGACCTTGT 1427460 Query 60996 CACTTACGACAATCCTCGGTCGGTTCTGGATAAAGCAAAATATGTATTGGACTATAGCTT 61055 || ||||| || | |||| || | || |||| |||||||| | | | | | Sbjct 1427461 TACCTACGATGATTCGAGGTCAGTCATCGAGAAAGGCAAATATGTGAGGAATAACAAACT 1427520 Query 61056 GGGTGGTTTGTTCGCTTGGGAGATCGACGCCGACAACGGATTACTTCTAAACGCCATGAA 61115 || ||| | ||||||||||| || ||||| |||||||| |||| ||||| ||||| Sbjct 1427521 AGGCGGTCTTTTCGCTTGGGAAATAGACGCTGACAACGGTGATATTCTTAACGCAATGAA 1427580 Query 61116 CAGCGGTCTCGG 61127 || || ||||| Sbjct 1427581 CATGGGCCTCGG 1427592 >seq616 Length=113079 Score = 174 bits (192), Expect = 1e-38 Identities = 905/1421 (64%), Gaps = 35/1421 (2%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || || ||||| || | || || ||||||||||| | ||||| ||||| || || || Sbjct 35139 ACAGTAAATTGTATAGCGTTTGCTGCAGGTTTAGTACGTAGATAATACATTCCTGTTTTC 35198 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 |||||| | | |||||||||| ||| ||||| | | | ||| | || || || Sbjct 35199 AAACCCATTTTCCAGGAATAAAAATGAATAGAAGTTAGCTTCCCATAATTAGGTTCTGCA 35258 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 || || || | |||||||| ||||| || | | ||| | |||||| ||||| || Sbjct 35259 ACATGAATGTTGAATGATTGGCTTTGATCTATAAATGCTCCCCTGTCTGCTGCCAT-TTG 35317 Query 136819 AATAGTACTTTTTGC-TTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877 |||||| | || | |||||||||| | ||||| | | || | | | || Sbjct 35318 AATAGTGGTCTTAACAGAAATTTCCCAAACAGTTTTGTACAAATCTCTAATTTCTTTAGG 35377 Query 136878 AATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGAT---TTTCATCATGAGATC 136934 |||| | || || | |||| || || ||||| | |||||| || ||||| || Sbjct 35378 AATTACCTCAATGCTTTGTATGGAGCCATTGTTGTGGATGATAAGGTTTTTCATGTCTTC 35437 Query 136935 AGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 | | | || | ||| ||| |||| | | | ||||| ||||| || |||||| | Sbjct 35438 ATCCCACAATTC--AGCT-TCTGTGAGATCACGTAATAGATGGTGATTAACAACTTGAAA 35494 Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054 ||| || ||||| || | | || | ||| || | || || || || || || Sbjct 35495 TTCACCTGATAGAACGCGTCTCTGATATATATTGGAGGTTATGGGTTCAAATGACTCATT 35554 Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114 || || | ||| || || || | ||||| |||||| ||| | || | ||| || | Sbjct 35555 ATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTTCT 35614 Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGATTG 137174 | || ||| || | || || || | | |||||| ||||| ||| | | | Sbjct 35615 AAGGCCATGTTTTGCAATTTTTTCTTTCAAGGCAGTCCAGTCCCACA---AGTTAGTTGG 35671 Query 137175 GGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATAAGA 137234 || ||||||||| ||| | || |||| ||| | || || ||||| || |||||| Sbjct 35672 AGTCTTATTCCACATATCGTATTGTAAAATTCCTTGGCTCGCCGGACTGCCTTCATAAGT 35731 Query 137235 ATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGTAAAT 137294 ||||| ||| | || || | || | || | ||||| || || ||||| Sbjct 35732 TTCATAGACTCCATATTTTTCGGCTAATTGACAGCTTGCTTCAAGTGCTCCGTAATAAAT 35791 Query 137295 AGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCATATCCAA 137354 ||||| | |||| | ||| | | | | || || || ||||| || ||| || Sbjct 35792 TGTTTCAAATATTTGTTGATTTAGCTTTATGGCCGGTTCACTATCGTATGGAATACGCAT 35851 Query 137355 TATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGTTTAAAATT 137414 | | || | ||||| | |||||| | || ||||| || ||||||||| | | ||| Sbjct 35852 AAGAATAAATGTGTCTGCTAATCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATT 35911 Query 137415 TGATATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATTGAGATTGTT 137474 ||| ||| ||| | || || ||| | || | || |||||| |||| ||||| | Sbjct 35912 GGATGTTTTAGCTTCAGGAACTGGGTAATAATTAACTTCAATAATTTTATTAAGATTCTG 35971 Query 137475 AGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGAAGCTTTTAGACTGTTTGTT 137534 || | || | | | |||| | || || |||| | | ||||| | || || Sbjct 35972 TGTTATGATTTTTGTAACTTCTTTTAGTTTATCAAAATTGTATGTTTTA---TCTTCATT 36028 Query 137535 AGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTTC-TGTATTGTCGC 137593 |||| | || | ||||||||||| || ||||| || || || | || | Sbjct 36029 GACAAACATGTTAAGTGCAATAGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAG- 36087 Query 137594 TGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCAAATTCTTTTGAT 137653 |||| | || ||||| | || | ||||||| || ||| | ||| ||||| | Sbjct 36088 TGTACTCCACTATTTCAGTACACAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGT 36147 Query 137654 TGTTTTTCTCGTTG-ACGTGATCTTTATATATCATATACGGAGTTCCGGTTTCGACTTGA 137712 | |||| |||| ||| | |||||||| | |||||| || ||||| ||||| ||||| Sbjct 36148 TACTTTTGCGGTTGCACGAG-TCTTTATACAACATATATGGTGTTCCCGTTTCTACTTGT 36206 Query 137713 GTCTCAACAATTTTTCTGTGAAGATCCAACGCCATAATTTG-TTCTCTAAAC--TTGCCT 137769 | || | ||| | | ||| || || ||| ||| || | || | || || Sbjct 36207 GCTTCTATAATAGCTTTCCACAGAGCCTGAGCTTTAACTTGCTTAACAAATCGATTTTCT 36266 Query 137770 TGAGCTTCAAAACTTTCGTATAGCCGTTTAAATTTTTCGCCCATAACAATC-GTTAGACC 137828 | |||| | | | |||||| | ||||| ||| ||| ||||||| | || || Sbjct 36267 T---TTTCATATTTCTTGTATAGTGCCTCAAATTCTTCTCCC-CAACAATCTGCTAAGCC 36322 Query 137829 CGGACACTCGTCGGGACACATCA-ACGACCATTTTCCTCCCGTCCTAACCCTTTCCATGA 137887 ||||| || | |||||||| | || | |||||| | | || || |||| ||| | Sbjct 36323 TGGACAGTCATGAGGACACATAAGACTCCAATTTTCATTAC-TCTCTACTCTTTTCATAA 36381 Query 137888 ACAGAGAAGGCGTCCATATAGCAAAAAGAAGGTCGCGAGCCTTCATA--TCTTCGGCGCC 137945 | | | ||| |||||| |||| ||| || || | ||| || || ||||| ||| Sbjct 36382 ATAAATCAGGTATCCATAAAGCATAAAAGAGTTCTCTAGC--TCGTACTTCTTCTTTGCC 36439 Query 137946 CATATTGCGTTTTAAATCCaaaaaagtaaaaaTATCAGCATGCCAAGGCTCGATATAGAC 138005 |||| ||| | ||| || || |||||||| |||||||| || || | || || Sbjct 36440 AGTATTTTTTTTCAGATCTAAGAATTCGAAAATATCTGCATGCCATGGTTCCAAGTATAC 36499 Query 138006 GGCCATAGCTCCTTTTCTTTTA---CCGCCTTGATCCACAT 138043 || | |||||| | |||| || |||||||| |||| Sbjct 36500 TGCAAAAGCTCCAGGACGTTTATTGCCCCCTTGATCTACAT 36540 >seq158 Length=707457 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/242 (69%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 25169 AACAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 ||||||| |||| | || || ||||| |||| || || | ||||| | || || || Sbjct 607070 AACAACAATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGA 607129 Query 25228 AGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 || || || ||||| | || || || || |||||||| ||||| || || Sbjct 607130 GGCTTCAGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCC 607189 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 || || || ||||||| | || |||||| || | ||||||| | | | | || Sbjct 607190 GGACCAACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGA 607249 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATG 25407 ||||||||| || ||||||||||| |||| || ||| | || | |||||||| ||||| Sbjct 607250 TTACAATATCCAGAAAGAATCCACTCTTCACTTGGTGCTTAGGCTTAGAGGAGGTAAATG 607309 Query 25408 AT 25409 || Sbjct 607310 AT 607311 >seq4 Length=2913607 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 105770 GCACGGCTTTCATGTACACGAATTCGGCGACACGAGCAACGGTTGCACGTCTGCCGGCGA 105829 |||||| || || || || || ||||| |||| | ||||| ||||| || ||||||| Sbjct 2347857 GCACGGTTTCCACGTGCATGAGTTCGGTGACAACACAAACGGCTGCACATCGGCCGGCGC 2347916 Query 105830 GCATTTCAACCCTACGG-GCATGGCTCACGGCGCGCCCAGCTCTGCCGTTCGTCACGTCG 105888 ||| || ||||| | ||| || ||||| | ||| | | |||| |||||||||| Sbjct 2347917 GCACTTTAACCCGCTGAAGCA-GGAGCACGGTGGCCCCGACGCGTCCGTGCGTCACGTCG 2347975 Query 105889 GTGATCTTGGCAATATTGATGC 105910 ||||||| ||||| ||||| || Sbjct 2347976 GTGATCTCGGCAACATTGAGGC 2347997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444978280434720