Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq116 123 2e-23 >seq116 Length=882076 Score = 123 bits (136), Expect = 2e-23 Identities = 347/524 (66%), Gaps = 28/524 (5%) Strand=Plus/Plus Query 99642 GGTTT-TATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAAATA 99700 ||||| || || | ||||||| || ||||| ||||| || || || ||||| ||||| Sbjct 457605 GGTTTCTACTACCTTGGGCGCGGTGATGAAGTTCGCTGTGCATTCTGTAAAGTAGAAATT 457664 Query 99701 ATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAATGC 99760 ||||| ||| ||| || |||||||| || |||||| |||||||||||||| ||||| Sbjct 457665 ATGCGATGGGCGGAAGGAGACGACCCTGCGAAAGATCACAAACGATGGGCGCCCCAATGT 457724 Query 99761 CCGTTTATGCAGCAGAAT-CGAACGGTT------------GCTACGGTCATTC--AA--T 99803 |||||| | | | | |||||||| | | ||| ||| || | Sbjct 457725 CCGTTTTTACGTAATCTTTCGAACGGTACTAATGGCAGCGGAGAAGGTAGTTCGGAAGGT 457784 Query 99804 C---ACCAGTGCAAATTGTTAGTAAAGATGAATGTAAATTGTCGCGTAAAATGTCCGGCC 99860 | || |||| | || | || | | | ||| ||||| || |||| | Sbjct 457785 CGCGACGAGTGTGGTGCGCGAGCAGCGACGCGGG-AGCCTGT-GCGTA---TGCCCGGAC 457839 Query 99861 CCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTGGATTGGCCGC 99920 | ||||| || || | || | | | ||| | | | ||| ||||||||||| Sbjct 457840 CTGTGCATCCCCGCTATGCAACAGAGTTATCGCGTCTCGCCAGTTTCAAGGATTGGCCGC 457899 Query 99921 TCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACACCGGCAAAG 99980 | || |||||||||||| || | || ||||| || |||| ||||||||| ||| Sbjct 457900 GTTGCATGCGCCAAAAACCAGAGGAACTCGCGGAAGCAGGATTTTTCTACACCGGCCAAG 457959 Query 99981 GTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAGCACCGACG 100040 | || ||| |||||||| ||||||| || || |||||||| ||||||| | ||| | Sbjct 457960 GGGATAAAACGAAATGTTTCTATTGCGATGGAGGTCTCAAAGATTGGGAAAACGACGATG 458019 Query 100041 AGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCTTGTAAAGG 100100 || ||| | | || || |||||||| ||||| || | || |||| ||||| || | Sbjct 458020 TTCCATGGGAACAGCATGCCCGTTGGTTCGATCGTTGTGCGTATGTGCAACTTGTTAAAG 458079 Query 100101 GTTACGACTACGTGCAGCGCGTGCTTAGC-GAAGCGTGCGTCAT 100143 | || || || ||| | || ||| | |||||||| || || Sbjct 458080 GCCGTGATTATGTCCAGAGGGT-ATTATCGGAAGCGTGTGTTAT 458122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402227261305568