Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq36 111 1e-19 >seq36 Length=1647457 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||||||| | | ||| || | || || ||||| || || ||||| Sbjct 455564 TCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAG 455505 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | |||| || || ||||| ||||||| ||| | | | Sbjct 455504 ATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTAACATTC 455445 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || ||||| | ||||| |||||||| || | ||||| ||| Sbjct 455444 TCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTTACCTGTGAGGGTTTTGACA 455385 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 455384 AAGATCTGCAT 455374 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||||||| | | ||| || | || || ||||| || || || || Sbjct 455792 TCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAG 455733 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 455732 ATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTC 455673 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | |||||| |||| || || ||||| || || | |||||| || Sbjct 455672 TCAATAGTGTCAGATGGTTCCACTTCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACG 455613 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 455612 AAGATCTGCAT 455602 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 || ||||| || ||| |||||||| || ||||| |||| | || || |||| || Sbjct 935554 ACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGAGAGAGTACGGCCGTCCTCG 935613 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| ||||| || | |||||||| |||| ||||| || ||||||||| || Sbjct 935614 AGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCC-TG 935672 Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| | ||| | | | | | ||||| | ||||| || | ||||||||||| Sbjct 935673 AATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCACTTCAAGTGTGATCGTTTT 935732 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| |||| || || || ||||| ||||| Sbjct 935733 ACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| || | || | || ||||| | || ||| || |||||||||||||| | Sbjct 937289 TTCCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTG 937348 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || || |||| || ||||| || || ||||| || | |||||||| || | || Sbjct 937349 ACAGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAG 937408 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| || ||||| ||| ||| ||| || || | | | | | ||||| | |||| Sbjct 937409 GAATGCCTTCCTTATCCTGGAT-TTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCC 937467 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| ||||| || |||| || || ||||| || ||||| Sbjct 937468 ACTTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| || | | || ||| | || || | |||||| || ||||| Sbjct 937555 TCCTTCTGAATGTTGTAGTCTGATAGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAA 937614 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | |||||||| || | ||||| || || ||||| ||| || ||||| | || Sbjct 937615 ATGAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTCACATTT 937674 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || || |||| ||||| ||||| || || ||||| || || Sbjct 937675 TCAATAGTGTCTGAAGGCTCAACTTCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACG 937734 Query 35726 AATATCTGCATTCTG 35740 || ||||||||| || Sbjct 937735 AAGATCTGCATTTTG 937749 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | ||| || | || || ||||| || || || || Sbjct 456018 CTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAA 455959 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| || || ||||| ||||||| ||| | | | Sbjct 455958 GATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTTACATT 455899 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | |||||| |||| || || ||||| || || | |||||| || Sbjct 455898 ---CTCAGTGTCAGATGGTTCCACTTCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAAC 455842 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 455841 GAAGATCTGCAT 455830 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565 ||||||||| || | | | ||||| || | ||| |||||| || |||||||| || Sbjct 456285 ATTTCCACCGCGAAGACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 456226 Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625 || | ||| || | || || ||||| || || || || ||||| ||||||||||| | Sbjct 456225 GGAGAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGG 456166 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTC 35685 |||| || || ||||| ||||||| ||| | | | | | ||||| | || Sbjct 456165 GGGAATGCCTTCTTTGTCTTGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTC 456106 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || ||||| || || | || || ||||| |||||||| Sbjct 456105 AACTTCAAGAGTAATAGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450675993584680