Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq616 167 3e-36 >seq616 Length=113079 Score = 167 bits (184), Expect = 3e-36 Identities = 501/753 (67%), Gaps = 33/753 (4%) Strand=Plus/Plus Query 110680 AAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG-TTCAAAGCATT 110738 ||| ||||||| || | |||| | || || || | || ||||| |||||| | | Sbjct 35492 AAATTCACCTGATAGAACGCGTCTCTGATATATATTGGAGGT-TATGGGTTCAAATGACT 35550 Query 110739 CATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGT 110798 ||||||| || | ||||| || || || ||||| ||||| || || | ||||| || Sbjct 35551 CATTATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGT 35610 Query 110799 TACGAAGACCCTTCTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTGAG 110853 | | ||| || | | ||| || ||| || | || |||||| | ||| || Sbjct 35611 TTCTAAGGCCATGTT--TTGCAATTTTTTCTTTCAAGGCAGTCCAGTCCCACAAGTT-AG 35667 Query 110854 CTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTC 110913 |||| || |||| |||| || | || | | |||||| ||| ||| || || Sbjct 35668 -TTGGAGTCTTATTCC-ACATATCGTATTGTAAAATTCCTTGGCTCGCCGGACTGCCTTC 35725 Query 110914 AAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTG 110973 | | ||||||||| || | ||| || |||| |||||| || || || | | ||| Sbjct 35726 ATAAGTTTCATAGACTCCATATTTTTCGGCTAATTGACAGCTTGCTTCAAGTGCTCCGTA 35785 Query 110974 ATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC---TTCATCTGAATCAAATGC 111030 ||| || |||||||| || | ||| | || |||| |||| || ||| ||| Sbjct 35786 ATAAATTGTTTCAAATATTTGTTGATTTAGCTTTATGGCCGGTTCA-CT--ATCGTATG- 35841 Query 111031 GTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGT 111089 | | ||| || ||||||| || || | ||||| || || | |||||| ||||||| Sbjct 35842 GAATACGCATAAGAATAAATGTGTCTGCTAATCCTTGCACTCCTATACCAATTGGTCTGT 35901 Query 111090 GTCGCATATTAGAC--TTTCGCG-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTC 111146 ||| |||||| || ||| || ||| ||| || ||| |||| ||||| | | Sbjct 35902 GTCTCATATTGGATGTTTTAGCTTCAGG---AACTGGGTAATAATTAACTTCAATAATTT 35958 Query 111147 GGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGC 111206 || ||||| | || | || ||||| | ||| | ||||| ||| ||| | || Sbjct 35959 TATTAAGATTCTGTGTTATGATTTTTGTAACTTCTTTTAGTTTATCAAAATTGTATGTTT 36018 Query 111207 GAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 111266 | |||||||||||| || | ||| || || || ||||||||||||||||| || Sbjct 36019 TA---TCTTCATTGACAAACATGTTAAGTGCAATAGAGGCCAAATTGCAAACAGCAACCT 36075 Query 111267 CATC--CTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||| || | |||||||| | ||||| ||||| || ||| | |||||| || || Sbjct 36076 CATCAGCTGA--AGTGTACTCCACTATTTCAGTACACAAATTGCTGCACTTAATAGTTCC 36133 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 | ||| ||||||||||| || |||||||| || || || | ||| || || || || Sbjct 36134 TAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTCTTTATACAACATATATGGTGTTCC 36193 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||| || |||| || | |||||| ||||| Sbjct 36194 CGTTTCTACTTGTGCTTCTATAATAGCTTTCCA 36226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627868154301600