Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq616 102 1e-16 >seq616 Length=113079 Score = 102 bits (112), Expect = 1e-16 Identities = 251/380 (66%), Gaps = 3/380 (1%) Strand=Plus/Minus Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945 |||||||||||||| | | | ||| || || || |||||||| ||| | || |||| Sbjct 36228 TGTGGAAAGCTATTATAGAAGCACAAGTAGAAACGGGAACACCATATATGTTGTATAAAG 36169 Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005 || | || |||| || ||||| ||||| ||| | || || ||| | |||| | | Sbjct 36168 ACTCGTGCAACCGCAAAAGTAACCAAAAAAATCTAGGAACTATTAAGTGCAGCAATTTGT 36109 Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 105065 |||| ||||| |||| | || |||||| ||||| || || | || || | Sbjct 36108 GTACTGAAATAGTGGAGTACACTTCAGCTGATGAGGTTGCTGTTTGCAATTTGGCCTCTA 36049 Query 105066 TCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACG 105125 | || || || || ||| || ||| || |||| ||| ||| ||||| | | Sbjct 36048 TTGCACTTAACATGTTTGTCAATGAAGA---TAAAACATACAATTTTGATAAACTAAAAG 35992 Query 105126 AAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 105185 ||||||| |||| | || | || || || | | ||||||| |||| |||||| | Sbjct 35991 AAGTTACAAAAATCATAACACAGAATCTTAATAAAATTATTGAAGTTAATTATTACCCAG 35932 Query 105186 TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTC 105245 || ||| | ||| |||||||||||| | ||||||||| | || || || || Sbjct 35931 TTCCTGAAGCTAAAACATCCAATATGAGACACAGACCAATTGGTATAGGAGTGCAAGGAT 35872 Query 105246 TCGCGGATGTATTCATTCTT 105265 | || || ||| |||||| Sbjct 35871 TAGCAGACACATTTATTCTT 35852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583108634548040