Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq134 96.9 3e-15 >seq134 Length=761937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/212 (71%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 111771 CTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAA 111830 |||||| |||||||||||||||||||| | ||| | || || || || || || || Sbjct 24554 CTCCAAGCCAGTGATGTGTGCAATCATATGTGTTAATAAGGAATAGCTGGCTATATTGAA 24613 Query 111831 TGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTG 111890 |||||| |||| |||||| || | ||||||||||||||| || |||| ||| Sbjct 24614 TGGCACTCCTAAGCCCATGTCAGCACTTCTTTGATATAGCTGGCAAGATAATTTTCCACT 24673 Query 111891 TGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT---CCCA--TTCATA 111945 | |||||| |||||| || ||| || || || | ||||| |||| || | Sbjct 24674 GGCCACATAGAATTGAGCCAGACAATGGCATGGTGGTAGAGCCATTAACCCAAGGTC-TG 24732 Query 111946 AAGGGTCCCCATGCACACATGATCATCCTTCT 111977 |||| | |||||||||||| ||||| || || Sbjct 24733 AAGGAT-TCCATGCACACATTATCATTCTCCT 24763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391845902634973