Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8348 104 3e-17 seq5493 98.7 1e-15 >seq8348 Length=1183 Score = 104 bits (114), Expect = 3e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| |||| |||||| | ||||||||| || || || || || |||| Sbjct 1025 GCGTGAAGATGTAACGGGGGCTGGCAGAATCCTTGCCGCCGTTGAGTCGAGTACCGAACT 966 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || ||||| || ||||||| |||||||| ||||||| | || || ||||| |||| Sbjct 965 GGCCCCGCGGCTCTAGCAGGTTGATGTTGTTGGAGCCCACGTAGTTTTGCGCCAAGTTCA 906 Query 152147 CAATCGT 152153 | ||||| Sbjct 905 CGATCGT 899 >seq5493 Length=1575 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| |||| |||||| | |||||||| || || || || || |||| Sbjct 1401 GCGTGAAGATGTAACGGGGGCTGGCAGAGTCCTTGCCGCCGTTGAGTCGAGTACCGAACT 1342 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || ||||| || ||||||| |||||||| ||||||| | || || ||||| |||| Sbjct 1341 GGCCCCGCGGCTCTAGCAGGTTGATGTTGTTGGAGCCCACGTAGTTTTGCGCCAAGTTCA 1282 Query 152147 CAATCGT 152153 | ||||| Sbjct 1281 CGATCGT 1275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547073238185800