Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq36 196 5e-45 seq158 129 7e-25 seq175 91.5 2e-13 >seq36 Length=1647457 Score = 196 bits (216), Expect = 5e-45 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| ||||| |||||||||||||| |||||| | | Sbjct 456055 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACTATTACTCTTGAAGTTGAGCCTTCT 456114 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 456115 GACACCATTGAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 456174 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| || || |||||||||| || ||||| | ||||| || Sbjct 456175 CAGCGATTGATCTTCGCTGGCAAACAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 456234 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || |||||||| || || | ||||||||||||||| Sbjct 456235 ATCCAGAAGGAGTCTACTCTTCACCTGGTGCTTCGTCTTCGCGGTGGA 456282 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || |||||||| ||||| || || || || ||||| || ||| | | Sbjct 935762 ATGCAAATATTCGTTAAGACGCTGACCGGTAAAACGATCACACTTGAAGTGGAGCCTTCT 935703 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| ||||||||||||||||| || |||||||| || ||| Sbjct 935702 GACACAATTGAGAATGTTAAGGCCAAAATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 935643 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| |||||||| |||||||| | ||||| || | ||||| ||| Sbjct 935642 CAGCGACTTATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAAT 935583 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||| | ||| |||| | || |||||||| || Sbjct 935582 ATCCAAAAGGAATCTACTTTGCATTTAGTACTACGACTTCGCGGCGG 935536 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| ||||| || || || |||||||||||| | Sbjct 455146 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACAATCACCCTTGAGGTTGAGCCTTCA 455205 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || || || ||||| || || ||||| |||||||| Sbjct 455206 GACACTATTGAAAATGTAAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAA 455265 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || || || || || ||||||| |||||||| | ||||| || Sbjct 455266 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGTACCCTTTCCGACTACAAC 455325 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || | |||||||| ||||| Sbjct 455326 ATCCAGAAGGAGTCAACTCTTCACCTGGTGCTCCGTCTTCGTGGTGG 455372 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| | || || || ||||| ||| | || |||||| | Sbjct 937746 AATGCAGATCTTCGTAAAGACTTTAACTGGGAAAACTATCACTTTGGAAGTTGAGCCTTC 937687 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| ||||||| ||||| || ||||| || || ||||||||||| || Sbjct 937686 AGACACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 937627 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| |||||||| || ||||| | || |||| || || ||| ||||||| || Sbjct 937626 GCAGCGTCTCATTTTTGCCGGAAAGCAGTTAGAAGATGGGCGCACTCTATCAGACTACAA 937567 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||||||||| ||||| | || | || || |||||||| Sbjct 937566 CATTCAGAAGGAATCCACACTTCACTTGGTGCTCCGCCTCCGCGGTGG 937519 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||||||||| || ||||| || || || || || || || || Sbjct 937517 ATGCAAATTTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGAACCATCG 937458 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || |||||||| ||||| ||||| || ||||||||||| ||| Sbjct 937457 GACACAATTGAGAATGTTAAAGCTAAAATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 937398 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || || || || ||||| | || || || |||| || || Sbjct 937397 CAGCGACTTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTACAAC 937338 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || || || |||||||| ||| |||| | | || ||||||||| Sbjct 937337 ATTCAGAAAGAGTCCACTCTGCATTTAGTACTCAGACTCCGCGGTGGA 937290 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || || |||||||| || || || || || | Sbjct 455602 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACTATTACACTGGAAGTGGAACCATCT 455661 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | |||||||| || || ||||||||||| ||||| ||||||||| Sbjct 455662 GACACTATTGAGAATGTAAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 455721 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || || || |||||||||| || ||||| | || || || Sbjct 455722 CAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGCACCCTTTCTGATTACAAC 455781 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||||||| || || | || | ||||| || ||||| Sbjct 455782 ATTCAAAAGGAATCCACCCTGCACTTGGTACTTCGTCTGCGTGGTGG 455828 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || | || || || || || ||||| || |||||| | Sbjct 454918 ATGCAGATTTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCCGTCA 454977 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | || ||||||||||| || ||||| || ||||| ||||| ||| Sbjct 454978 GACACTATTGAGAACGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGATCAG 455037 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| |||||| | || || | || ||||| |||| ||||| Sbjct 455038 CAGCGACTGATCTTTGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTATAAC 455097 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || | ||||| |||||||| Sbjct 455098 ATCCAGAAGGAGTCAACTCTTCACCTGGTGCTCCGTCTGCGCGGTGG 455144 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || || || || || || |||||||||||| | Sbjct 455374 ATGCAGATCTTTGTCAAAACCCTCACAGGTAAAACCATCACCCTTGAGGTTGAGCCTTCA 455433 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 455434 GACACTATCGAGAATGTTAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455493 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || || || || ||||||| || ||||| | || || || Sbjct 455494 CAGCGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCTGATTACAAC 455553 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||||||| || || | || | ||||| || ||||| Sbjct 455554 ATTCAAAAGGAATCCACCCTGCACTTGGTACTTCGTCTGCGTGGTGG 455600 Score = 123 bits (136), Expect = 3e-23 Identities = 164/227 (72%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || || || ||||| || || || || || | Sbjct 455830 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACAATTACACTGGAAGTGGAACCATCT 455889 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || || ||| | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 455890 GA---CACTGAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455946 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || || || || ||||||| || ||||| ||||||| || Sbjct 455947 CAGCGATTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCAGACTACAAC 456006 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || |||||||| || || | ||||| || ||||| Sbjct 456007 ATCCAGAAAGAGTCAACTCTTCACCTGGTGCTCCGTCTGCGTGGTGG 456053 >seq158 Length=707457 Score = 129 bits (142), Expect = 7e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||| || || || || ||||| || || |||||||| ||| | Sbjct 607076 AATGCAGATATTCGTCAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAGGCTTC 607135 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | |||| |||||||||| || || || || || || || ||||| ||||| Sbjct 607136 AGACACCATCGAAAATGTGAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCGGACCA 607195 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| || || || || || ||||| | || |||| ||||| || | || || || Sbjct 607196 ACAGCGACTCATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACTCTGTCTGATTACAA 607255 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 | |||| || |||||||||||||| Sbjct 607256 TATCCAGAAAGAATCCACTCTTCA 607279 >seq175 Length=629782 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||||||||| ||| | Sbjct 293656 ATGCAGATCTTCGTTAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGCCCTCG 293597 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| || || ||||| || ||||||||||| ||||| || ||| Sbjct 293596 GACACTATCGAGAATGTGAAAGCCAAGATTCAAGATAAGGAGGGAATCCCTCCTGATCAG 293537 Query 27526 CAG 27528 ||| Sbjct 293536 CAG 293534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570161613145520