Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 1e-13 >seq36 Length=1647457 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| || || || ||||| ||| || ||| | || || ||| || | Sbjct 937517 ATGCAAATTTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGAAC-CATC 937459 Query 27850 G---ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | || || | ||| || ||| ||||| || || ||||| |||| || Sbjct 937458 GGACACAATTGAGAAT--GTTAAAGCTAAAATCCAGGATAAGGAAGGCATTCCTCCAGAT 937401 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 ||||| || | || |||||||||||||| | || |||| |||| |||| |||||| Sbjct 937400 CAGCAGCGACTTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTAC 937341 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 ||||| || |||||| |||| ||||||| || Sbjct 937340 AACATTCAGAAAGAGTCCACTCTGCATTTAGT 937309 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || |||||||| ||||| ||| |||||| | || || ||| | Sbjct 455830 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACAATTACACTGGAAGTGGAACCATCT 455889 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| || | ||| || || ||| || ||||||||||| |||| || ||| Sbjct 455890 GACACTG-AGAAT--GTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455946 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 || || || || || ||||| ||||| | || || | |||| | | || || |||||| Sbjct 455947 CAGCGATTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCAGACTACAAC 456006 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| |||||| ||| | || |||| | ||| ||||||| || Sbjct 456007 ATCCAGAAAGAGTCAACTCTTCACCTGGTGCTCCGTCTGCGTGGTGG 456053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355771880949417