Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq36 102 7e-17 seq116 89.7 4e-13 >seq36 Length=1647457 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 || ||||| || ||| |||||| || || || ||||| | || || || |||| ||| Sbjct 937309 ACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTGCGGCCGTCCTCA 937368 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 |||||||| || ||||| ||||| |||||||| || | || | || || || ||| | Sbjct 937369 AGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGG 937428 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 ||||| ||| | || | | || || | ||||| |||| ||||| |||| Sbjct 937429 ATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAGTGTGATTGTTTTG 937488 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||||||| || ||||| |||||||| Sbjct 937489 CCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| || ||||| || || ||||| | ||| || || | || ||| Sbjct 455582 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCA 455523 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| ||||| || | ||||||||||| | ||| | || |||||||| | Sbjct 455522 AGCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGG 455463 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || | || | | || || | ||| || || | ||||| |||| Sbjct 455462 ATCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTTA 455403 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || ||||| |||||||| ||||| Sbjct 455402 CCTGTGAGGGTTTTGACAAAGATCTGCAT 455374 >seq116 Length=882076 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 92629 AACCAACCGGCATGCTGTTGCCAAGGATCGTCGTATGGTTGCCAATCGCGAAGCCCACCA 92688 ||||||| ||||||||||| ||| ||| | |||| || |||||| || || ||| Sbjct 458047 AACCAACGGGCATGCTGTTCCCATGGAACATCGTCGTTTTCCCAATCTTTGAGACCTCCA 457988 Query 92689 TCGCAATAAAAACACTTTACTTTATCTCCGGCGCCGGTGTAATAAAACCCCGCTTCAGCC 92748 |||||||| ||||| || |||||| || ||||||||| |||| || ||||| || Sbjct 457987 TCGCAATAGAAACATTTCGTTTTATCCCCTTGGCCGGTGTAGAAAAATCCTGCTTCCGCG 457928 Query 92749 AACTCCTCGGGTGTTTG 92765 | ||||| ||| |||| Sbjct 457927 AGTTCCTCTGGTTTTTG 457911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429436338499223