Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq36 129 4e-25 seq116 82.4 5e-11 >seq36 Length=1647457 Score = 129 bits (142), Expect = 4e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 ||| |||||||||||||| |||||| | || || ||||| ||||||||||||||||| | Sbjct 454914 TAAGATGCAGATTTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTCGAAGTTGAGCC 454973 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| | | ||| |||||| || || |||||| | || ||||| Sbjct 454974 GTCAGACACTATTGAGAACGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGA 455033 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||||| | || ||||| || || ||| | ||||||| ||||| | ||||| Sbjct 455034 TCAGCAGCGACTGATCTTTGCTGGAAAGCAATTAGAAGACGGCCGCACCCTCTCAGATTA 455093 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||||| || || ||||| || Sbjct 455094 TAACATCCAGAAGGAGTCAAC 455114 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || || || || ||||| ||||| || ||||| || | || Sbjct 937517 ATGCAAATTTTTGTCAAGACGCTGACTGGCAAAACAATCACACTGGAAGTGGAACCATCG 937458 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | |||| | || || ||||| | || |||||||| Sbjct 937457 GACACAATTGAGAATGTTAAAGCTAAAA-TCCAGGATAAGGAAGGCATTCCTCCAGATCA 937399 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || |||||||| ||||| || || |||| |||||| | |||||||| Sbjct 937398 GCAGCGACTTATCTTTGCCGGAAAACAGCTTGAGGACGGCCGCACTCTGTCAGATTACAA 937339 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || ||||||||||| | |||||||| Sbjct 937338 CATTCAGAAAGAGTCCACTCTGCATTTAGT 937309 Score = 125 bits (138), Expect = 5e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| || ||||| ||||| || || ||||| | | Sbjct 455374 ATGCAGATCTTTGTCAAAACCCTCACAGGTAAAACCATCACCCTTGAGGTTGAGCCTTCA 455433 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| |||| | ||| || ||||||||||| | || ||||| || Sbjct 455434 GACACTATCGAGAATGTTAAGGC-AAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCA 455492 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || |||||||||||||| || || || | ||||| | |||||||| Sbjct 455493 GCAGCGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCTGATTACAA 455552 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| || ||||| Sbjct 455553 CATTCAAAAGGAATCCAC 455570 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || || | || || ||||| |||||| | |||||||| | Sbjct 937748 AAAATGCAGATCTTCGTAAAGACTTTAACTGGGAAAACTATCACTTTGGAAGTTGAGCCT 937689 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||||| |||||| | || ||||| ||||||||||| | || |||||| Sbjct 937688 TCAGACACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGAT 937629 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || |||||||| || || | ||||| | |||||| || || ||| Sbjct 937628 CAGCAGCGTCTCATTTTTGCCGGAAAGCAGTTAGAAGATGGGCGCACTCTATCAGACTAC 937569 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| || || || |||||| | || || || Sbjct 937568 AACATTCAGAAGGAATCCACACTTCACTTGGT 937537 Score = 114 bits (126), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||| || || || || ||||||||||| || ||||| || | | Sbjct 935762 ATGCAAATATTCGTTAAGACGCTGACCGGTAAAACGATCACACTTGAAGTGGAGCCTTCT 935703 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| |||| | |||||| ||||| ||||| | || || ||||| Sbjct 935702 GACACAATTGAGAATGTTAAGGC-CAAAATTCAGGACAAGGAAGGCATTCCTCCGGATCA 935644 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || |||||||| || || || || |||| || ||| | ||| ||||| Sbjct 935643 GCAGCGACTTATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAA 935584 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| || || || || |||||||| Sbjct 935583 TATCCAAAAGGAATCTACTTTGCATTTAGT 935554 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || ||||| ||||| || || ||||| | | Sbjct 455146 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACAATCACCCTTGAGGTTGAGCCTTCA 455205 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| |||| || || ||||||||||| | || ||||| ||| Sbjct 455206 GACACTATTGAAAATGTAAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAA 455265 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || || ||||||||||| || || || | || || | ||| |||||| Sbjct 455266 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGTACCCTTTCCGACTACAAC 455325 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 455326 ATCCAGAAGGAGTCAAC 455342 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||||||||| ||||| |||||||| || || || ||||| || | | Sbjct 455602 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACTATTACACTGGAAGTGGAACCATCT 455661 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | |||| || || ||||| || || | || ||||| || Sbjct 455662 GACACTATTGAGAATGTAAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 455721 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || ||||||||||| || || || | ||||| | ||||||||| Sbjct 455722 CAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGCACCCTTTCTGATTACAAC 455781 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || ||||| Sbjct 455782 ATTCAAAAGGAATCCAC 455798 Score = 111 bits (122), Expect = 1e-19 Identities = 144/197 (73%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||||||||| ||||| |||||||| || || || ||||| || | | Sbjct 455830 ATGCAGATCTTCGTTAAAACTCTCACTGGAAAAACAATTACACTGGAAGTGGAACCATCT 455889 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||||| ||| | || |||| | | ||||||||||| | || ||||| || Sbjct 455890 GACACTGAG--AATGTAAAGGCAAAGA-TCCAAGACAAAGAAGGCATTCCCCCAGACCAG 455946 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || ||||||||||| || || || | ||||| | || |||||| Sbjct 455947 CAGCGATTGATCTTCGCCGGCAAACAGCTTGAGGATGGCCGCACCCTTTCAGACTACAAC 456006 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 456007 ATCCAGAAAGAGTCAAC 456023 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || ||||| || ||||| |||||||| | | Sbjct 456055 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACTATTACTCTTGAAGTTGAGCCTTCT 456114 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| ||| || ||||||||||| | || ||||| || Sbjct 456115 GACACCATTGAGAATGTAAAGGCAAAGATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 456174 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || || |||||||| || || || | ||||| | ||| |||||| Sbjct 456175 CAGCGATTGATCTTCGCTGGCAAACAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 456234 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 456235 ATCCAGAAGGAGTCTAC 456251 >seq116 Length=882076 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33159 CATTGAGGAGCAAATTTTTTGTGGTCCAACATAGGATCGTCACCGTGCTGCCAACGCATT 33218 ||||| || || || |||||| || | ||| ||||| || | | ||| ||||| Sbjct 457723 CATTGGGGCGCCCATCGTTTGTGATCTTTCGCAGGGTCGTCTCCTTCCGCCCATCGCATA 457664 Query 33219 ATTTCTACTTTACAAAACGCGCAACGAGTTTCGTCGCCGACGCCCAAA-TAATAGAAACC 33277 |||||||||||||| || || || ||| ||| || ||| ||||||| || |||||||| Sbjct 457663 ATTTCTACTTTACAGAATGCACAGCGAACTTCATCACCG-CGCCCAAGGTAGTAGAAACC 457605 Query 33278 ATTTTTTGCCAAAGCTTCCGGTGTAACACAATCAGACGTCCAATTAACAAAAGTTTTTAA 33337 ||| || || |||| ||||| || | | ||| ||| | |||||||| | Sbjct 457604 ATTACGAGCTAACTCTTCAGGTGTCACGTACGTGCTAGGCCACTTATCGAAAGTTTTCAG 457545 Query 33338 TCTTTCTTCTTC 33349 || ||||||||| Sbjct 457544 TCGTTCTTCTTC 457533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337923622082468