Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq44 214 1e-50 seq4 86.0 5e-12 >seq44 Length=1464967 Score = 214 bits (236), Expect = 1e-50 Identities = 340/488 (70%), Gaps = 0/488 (0%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 |||||||| || |||||||| |||||| || || || ||||| |||||||| || | Sbjct 1426406 GCGTACTTCGTAGAATGGGGCGTGTACCCGCGAAAGTTCCCCGTAGACAAAGTTCCCGTT 1426465 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 ||||| | | || || ||||||| || || || || || ||||| || ||||| ||| Sbjct 1426466 CCCAACCTGACCCACTTATTGTACGGCTTCATCCCGATTTGCGGCGGTGATGGCATTAAC 1426525 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | || ||| || ||||| | || ||||||| || ||| ||||||| Sbjct 1426526 GACAGTTTGAAGGAAATTGAGGGTAGTTTCCAAGCACTGCAACGCTCCTGCAGCGGTCGG 1426585 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || |||||||| ||||| ||||| |||||| || ||||||| || || || ||| Sbjct 1426586 GAAGACTTCAAAGTATCCATCCACGATCCTTGGGCTGCTTTGCAAAAGCCACAGAAGGGC 1426645 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 | | | ||||| ||||| ||||| ||||| || || ||| ||||| | ||| | Sbjct 1426646 TTATCGTCCTGGAATGAGCCTTACAAGGGCAATTTCGGTCAACTGATGATGTTGAAACAG 1426705 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500 || || ||| || | || ||||| || || | || || ||||| || | || || || Sbjct 1426706 GCCAAACCTGACCTGAAGATTCTTCCTTCAGTCGGTGGTTGGACCCTGGCTGATCCCTTC 1426765 Query 109501 TATTTTATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTTA 109560 | || | | || | || |||| | ||||||| || || || |||||| Sbjct 1426766 TTCTTCTTCGATGACAAAGTTAAGAGAGACCGCTTCGTTGGTTCAGTCAAGGACTTTTTA 1426825 Query 109561 CAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGGT 109620 || ||||||||||| || ||||| || |||||||||||||| || || || ||||| Sbjct 1426826 CAGACCTGGAAATTCTTCGATGGCGTTGATATTGATTGGGAGTTCCCTGGAGGTAAGGGA 1426885 Query 109621 GCCAATCC 109628 || || || Sbjct 1426886 GCTAACCC 1426893 >seq4 Length=2913607 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 103377 GTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCGTTT-CGCCGG 103435 |||||| | ||| || ||||| | ||| ||||||||| | |||||| | | | | Sbjct 2347989 GTTGCCGAGATCACCGACGTGACGCACGGACGCGTCGGGGCCACCGTGCTCCTGCTTCAG 2347930 Query 103436 TGGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTGCA 103495 ||| ||||| || |||||||||| ||||||||||| | |||| || ||||| |||| Sbjct 2347929 CGGG-TTAAAGTGCGCGCCGGCCGATGTGCAGCCGTTTGTGTTGTCACCGAACTCATGCA 2347871 Query 103496 CGTGAAAACCGTGC 103509 |||| ||||||||| Sbjct 2347870 CGTGGAAACCGTGC 2347857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409556596502589