Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq616 646 1e-180 seq200 100 4e-16 >seq616 Length=113079 Score = 646 bits (716), Expect = 1e-180 Identities = 1214/1763 (69%), Gaps = 50/1763 (3%) Strand=Plus/Plus Query 76802 TGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAA 76861 ||| ||||| ||||||||||| ||||| || ||||| | ||||| |||| || || Sbjct 35162 TGCAGGTTTAGTACGTAGATAATACATTCCTGTTTTCAAACCCATTTTCCAGGAATAAAA 35221 Query 76862 ATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACT 76921 ||| || || || || |||| |||| || || | |||||| || | || || || Sbjct 35222 ATGAATAGAAGTTAGCTTCCCATAATTAGGTTCTGCAACATGAATGTTGAATGATTGGCT 35281 Query 76922 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTC 76981 |||||| || || ||||| || || || ||||||| ||| ||||||| || |||||| Sbjct 35282 TTGATCTATAAATGCTCCCCTGTCTGCTGCCATTTGAATAGTGGTCTTAACAGAAATTTC 35341 Query 76982 CCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTT---TGTAT--TTTGAATG 77036 ||||| ||||||| | | | | | || || | |||| || | || |||| ||| Sbjct 35342 CCAAACAGTTTTGTACAAATCTCTAATTTCTTTAGGAA--TTACCTCAATGCTTTGTATG 35399 Query 77037 GAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTT 77096 || ||| | || || || || || || |||| |||||||| ||||| Sbjct 35400 GAGCCATTGTTGTGGATGATAAGGTTTTTCATGTCTTCATCCCACAATTCAGCTTCTGTG 35459 Query 77097 AAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATAC---TCTACGA 77153 | | | | | ||||| ||||||| | ||||||||| || || | || ||| || Sbjct 35460 AGATCACGTAATAGATGGTGATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCTGA 35519 Query 77154 GTGTAAATATTACTGGTATATGGTTCCACA-GATTCATTGTTTCCCAAAATTTGAGCAGT 77212 || ||||| ||| ||||| | || | || ||||| || || | ||||||||| || Sbjct 35520 ---TATATATTGGAGGT-TATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGCTGT 35575 Query 77213 AGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTT 77272 ||| || || ||||| || || || || | ||||| || |||||| || ||||| Sbjct 35576 AGATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTTCTAAGGCCATGTTTTGCAATTTT 35635 Query 77273 ATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTG 77332 ||||| | |||| ||||| | | | || || ||| | ||||||||| Sbjct 35636 TTCTTTCAAGGCAGTCCAGTCCCACAAGTTAGTTGGAGTCTTATTCCACATATCGTATTG 35695 Query 77333 TAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGC 77392 || |||||| | || || || | ||| |||||||| ||| | | |||| || Sbjct 35696 TAAAATTCCTTGGCTCGCCGGACTGCCTTCATAAGTTTCATAGACTCCATATTTTTCGGC 35755 Query 77393 TAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAG 77452 || || ||| || ||||| | ||||||||||||||||||||| || || | | ||| || Sbjct 35756 TAATTGACAGCTTGCTTCAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGATTTAG 35815 Query 77453 ATCTTGTGC---TTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAA 77509 | | || |||| ||||| | ||| | | | ||||||||| | |||||||| Sbjct 35816 CTTTATGGCCGGTTCA---CTATCGTATGGAATACGCATAAGAATAAATGTGTCTGCTAA 35872 Query 77510 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAAT 77569 ||| || ||||| |||||||| ||||| |||||| ||||||| |||||||||| |||| Sbjct 35873 TCCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATTGGATGTTTTAGCTTCAGGAAC 35932 Query 77570 AGGATAATAATTAATGTCTATAATTTTATTGAGATT---TCTAACAACTACTTTAACCAC 77626 || |||||||||| || ||||||||||| ||||| | | | | | | |||| Sbjct 35933 TGGGTAATAATTAACTTCAATAATTTTATTAAGATTCTGTGTTATGATTTTTGTAACT-- 35990 Query 77627 GTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATA---ACAAACATGTTCAAAGCTAT 77683 || ||||||||| ||||| || || |||| | ||||||||||| | || || Sbjct 35991 -TCTTTTAGTTTATCAAAATTGTATGTTTTATCTTCATTGACAAACATGTTAAGTGCAAT 36049 Query 77684 AGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACA 77743 ||| || | ||| ||||| || ||||||| ||| | || | | ||| || ||||| Sbjct 36050 AGAGGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACA 36109 Query 77744 TAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTC 77803 | ||| || || || ||||| || ||||||| |||||| || || ||||| ||||| Sbjct 36110 CAAATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTC 36169 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863 ||||| | ||| | || || || ||||| | |||| ||| ||||||| |||||| | Sbjct 36170 TTTATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACA- 36228 Query 77864 GACTCT-AGCTTTTATCATAGATTTGTA--TCGCCTCTCTCTTTCATATTGAGTATATAG 77920 || || |||||| | | | || | ||| | ||| ||||||||| | ||||| Sbjct 36229 GAGCCTGAGCTTTAAC--TTGCTTAACAAATCGATTTTCTTTTTCATATTTCTTGTATAG 36286 Query 77921 CCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAA 77980 |||||||| ||||||||| ||| | || || || || |||| || ||||| | Sbjct 36287 TGCCTCAAATTCTTCTCCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAG 36346 Query 77981 TGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040 ||| | ||| || |||| ||||||||| | |||||||||||||| |||| Sbjct 36347 ACTCCAATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATA 36406 Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100 ||| || |||| | || |||||| || || ||||| ||||| ||||| | || || Sbjct 36407 AAAGAGTTCTCTAGCTCGTACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTC 36466 Query 78101 CATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACC 78160 | |||||| | |||||||||||| | |||| ||| | | ||||||| |||||||| || Sbjct 36467 GAAAATATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCC 36526 Query 78161 TCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 78220 || ||||||| ||||||||| || || ||||| |||| |||||| || | || || || Sbjct 36527 CCCTTGATCTACATATCTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATT 36586 Query 78221 AGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGAT 78278 || ||||||||||||| ||||||| | || | || | || | | ||||| Sbjct 36587 GGAGACACCATTTGTTCCAGCAATATAAGTGCCTTTGGCTCTTATGCAGTGAACATGGAC 36646 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 || || ||||| || |||||||||| ||| || | || ||||| || || || Sbjct 36647 T--CCAATACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATATG 36704 Query 78339 CCCTCTATACTGTCATCCATCATGT----TAAGAAGAAAACAGCTAGACATTTGATGATG 78394 || || ||||| |||||| |||| ||||||| | || ||| | || | || Sbjct 36705 CCTTCAATACTATCATCCTTCATTGCAACTAAGAAGCATGAAGATAGC--TGTGGTCGTG 36762 Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454 ||| |||| |||||||||||| ||||| ||||| ||||||| || |||| Sbjct 36763 GC--GTTGCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAGTAA 36820 Query 78455 ATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCA 78513 ||| ||||| ||||| || | || || || || | || ||||||| | ||||||| Sbjct 36821 ATTATATGTATCAATTGCAGCATCAATATCTTCACCG-TGTATTCCTATAGACACACGCA 36879 Query 78514 TCAACATATGCTGAGGTCTTTCA 78536 ||| ||| || || || | |||| Sbjct 36880 TCAGCATGTGTTGTGGCCGTTCA 36902 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 ||| || ||||| ||||||||||||||| |||||||||||||||||||| ||||| || Sbjct 36990 CTTGTTGTTTATCTTCAACAAGTATGATCGCTCCAAAGTTTTAAAACCAAAGTAGTTATA 37049 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAAT 78633 | ||| ||||| || || | |||| |||||| Sbjct 37050 TTTAAAATCTCTGTCATACACAATAGCAGAAT 37081 >seq200 Length=575180 Score = 100 bits (110), Expect = 4e-16 Identities = 158/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||||||| || || || || || || || || ||||| |||||||| || || Sbjct 474935 TCATCTCTAGAGATCAACTCATTGCTGAAGGTAAGTCCAGGCATGAGTCCACGCTTCTTC 474876 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 ||||| ||||| | || || |||||| ||||| |||||||| ||||| ||||| || Sbjct 474875 AGCCAGAATATGGAGGCAAAGCTTCCAGAGAAGAAAATGCCTTCGACGGCGGCAAAAGCC 474816 Query 48285 GTAAGTCTCTCTCCGTAACTGGC----TTCGTTGTGTATCCACCGTTGTGCCCAATCAGC 48340 | ||||| ||| | |||| || | | | |||||| | | ||||| || || Sbjct 474815 ACGATCCTCTCGCCGAAGGTGGCGGTCTTGCTCGCG-ATCCACTGCAGCGCCCAGTCTGC 474757 Query 48341 CTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385 ||||||||| ||||| |||| || || || || || || || || Sbjct 474756 CTTCTTCTTCACACATGGCAAAGTCTCAATGGCGTTGAACAGGAA 474712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694487569593440