Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq616 668 0.0 seq200 96.9 5e-15 >seq616 Length=113079 Score = 668 bits (740), Expect = 0.0 Identities = 1222/1760 (69%), Gaps = 46/1760 (3%) Strand=Plus/Plus Query 75397 TGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAA 75456 ||| ||||| ||||||||||| ||||| || ||||| | ||||| |||| || || Sbjct 35162 TGCAGGTTTAGTACGTAGATAATACATTCCTGTTTTCAAACCCATTTTCCAGGAATAAAA 35221 Query 75457 ATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACT 75516 ||| || ||||| || |||| | || || || | |||||| || | || || || Sbjct 35222 ATGAATAGAAGTTAGCTTCCCATAATTAGGTTCTGCAACATGAATGTTGAATGATTGGCT 35281 Query 75517 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTC 75576 |||||| || || ||||| || || || ||||||| ||| ||||||| || |||||| Sbjct 35282 TTGATCTATAAATGCTCCCCTGTCTGCTGCCATTTGAATAGTGGTCTTAACAGAAATTTC 35341 Query 75577 CCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG-ATTTGTAT--TTTGAATGGA 75633 ||||| ||||||| | | | | | || || | |||| | | || |||| ||||| Sbjct 35342 CCAAACAGTTTTGTACAAATCTCTAATTTCTTTAGGAATTACCTCAATGCTTTGTATGGA 35401 Query 75634 TCCGCCATCAGATATAATTG-TA---TTCTTGATCTCATCATTCCACAATTTTCTCTCGG 75689 ||||| | | | || || || || || || |||| |||||||| || | Sbjct 35402 ---GCCATT-GTTGTGGATGATAAGGTTTTTCATGTCTTCATCCCACAATTCAGCTTCTG 35457 Query 75690 TTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAG 75749 | | | | | | ||||| ||||||||| ||||||||| || || | || | || Sbjct 35458 TGAGATCACGTAATAGATGGTGATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCT 35517 Query 75750 TGTAAATATTACTGGTATATGGTTCCACA-GATTCATTGTTTCCCAAAATTTGAGCAGTT 75808 || ||||| ||| ||||| | || | || ||||| || || | ||||||||| || Sbjct 35518 GATATATATTGGAGGT-TATGGGTTCAAATGACTCATTATTGCCAAGAATTTGAGCTGTA 35576 Query 75809 GAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTA 75868 || || || ||||| || || || || | ||||| || |||||| || ||||| Sbjct 35577 GATGCTGTGGGCATGGGAGCTACTAAAAGTGAGTTTCTAAGGCCATGTTTTGCAATTTTT 35636 Query 75869 TCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGT 75928 ||||| | |||| ||||| | | | ||| || ||| | |||||||||| Sbjct 35637 TCTTTCAAGGCAGTCCAGTCCCACAAGTTAGTTGGAGTCTTATTCCACATATCGTATTGT 35696 Query 75929 AGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCT 75988 | |||||| | ||| || || | ||| ||||| || || | ||||| ||| Sbjct 35697 AAAATTCCTTGGCTCGCCGGACTGCCTTCATAAGTTTCATAGACTCCATATTTTTCGGCT 35756 Query 75989 AGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGA 76048 | || || || || || | || ||||||||||||||||| || || | | ||| || Sbjct 35757 AATTGACAGCTTGCTTCAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGATTTAGC 35816 Query 76049 TCT-TG--CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGT 76105 | | || || |||| ||||| | ||| | | | ||||||||||| ||||||| | Sbjct 35817 TTTATGGCCGGTTCA---CTATCGTATGGAATACGCATAAGAATAAATGTGTCTGCTAAT 35873 Query 76106 CCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATA 76165 || || ||||| |||||||| ||||| |||||| ||||||| ||| |||||| |||| Sbjct 35874 CCTTGCACTCCTATACCAATTGGTCTGTGTCTCATATTGGATGTTTTAGCTTCAGGAACT 35933 Query 76166 GGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT-ACTTTAACCACGTC 76224 ||||||||||||| || ||||||||||| ||||| ||| | | ||| || || Sbjct 35934 GGGTAATAATTAACTTCAATAATTTTATTAAGATT-CTGTGTTATGATTTTTGTAACTTC 35992 Query 76225 CTTTAGTTTGAGAAAATCAAATTTTCCATCTA---TCACAAACATATTAAGAGCTATAGA 76281 |||||||| ||||| || || |||| | |||||||| ||||| || ||||| Sbjct 35993 TTTTAGTTTATCAAAATTGTATGTTTTATCTTCATTGACAAACATGTTAAGTGCAATAGA 36052 Query 76282 TGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAG 76341 || | ||| ||||| || ||||||| ||| | || | | ||| || || || | Sbjct 36053 GGCCAAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACACAA 36112 Query 76342 ATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTT 76401 ||| || ||||| |||||||| ||||||| |||||| || || ||| || ||||| || Sbjct 36113 ATTGCTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTCTTT 36172 Query 76402 ATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGAC 76461 ||| | | | | || ||||| ||||| | |||| ||| ||||||| |||||| | || Sbjct 36173 ATACAACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACA-GAG 36231 Query 76462 TCT-AGCTTTTATTATAGATTTGTA--TCGCTTCTCTCTTTCATATTG--TGTATATAAC 76516 || |||||| | | | || | ||| || ||| ||||||||| |||||| | Sbjct 36232 CCTGAGCTTTAACTT--GCTTAACAAATCGATTTTCTTTTTCATATTTCTTGTATAGTGC 36289 Query 76517 CGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAAT 76576 | |||||||| ||||||||| ||| | || || ||||| |||| |||||||| | Sbjct 36290 C--TCAAATTCTTCTCCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAGA 36347 Query 76577 GACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA 76636 ||| | ||| || || | ||||||||| | |||||||||||||| |||| | Sbjct 36348 CTCCAATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAA 36407 Query 76637 AATAGATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTC 76695 || || |||| | || ||| |||||| || || ||||| ||||| ||||||| ||| || Sbjct 36408 AAGAGTTCTCTAGCTCGTAC-TTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTC 36466 Query 76696 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACC 76755 | |||||| | |||||||||||| | |||| || | | | || || |||||||| || Sbjct 36467 GAAAATATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCC 36526 Query 76756 TCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTT 76815 || ||||||| |||||||||||| || ||||| |||| |||||| || | || ||| || Sbjct 36527 CCCTTGATCTACATATCTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATT 36586 Query 76816 AGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAG 76875 || |||||||||||||| ||||||| | || || | || || | | Sbjct 36587 GGAGACACCATTTGTTCCAGCAATATAAGTGCCTTTGGCTCTTATGCAGTGAACATGGAC 36646 Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCC 76935 || || ||||| || |||||| |||| |||||| | || ||||||||||| ||||| Sbjct 36647 TCCAATACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATATGCC 36706 Query 76936 CTCTATACTATCATCCATCAT----GTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 76991 || |||||||||||| |||| ||||||| | || ||| | || | || Sbjct 36707 TTCAATACTATCATCCTTCATTGCAACTAAGAAGCATGAAGATAG--CTGTGGTCGTG-- 36762 Query 76992 CAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGAT 77051 ||| |||| ||| ||||| || ||||| || || ||||||| || |||| || Sbjct 36763 GCGTTGCTGCTGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAGTAAAT 36822 Query 77052 TGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATC 77110 | ||||| ||||| | || || ||||| || | || ||||||| || ||||||||| Sbjct 36823 TATATGTATCAATTGCAGCATCAATATCTTCACCG-TGTATTCCTATAGACACACGCATC 36881 Query 77111 AACATATGCTGAGGTCGTTC 77130 | ||| || || || ||||| Sbjct 36882 AGCATGTGTTGTGGCCGTTC 36901 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 ||| || ||||| ||||||||||||||| |||||||||||||||||||| ||||| || Sbjct 36990 CTTGTTGTTTATCTTCAACAAGTATGATCGCTCCAAAGTTTTAAAACCAAAGTAGTTATA 37049 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAAT 77228 | ||| ||||| || || | |||| | |||| Sbjct 37050 TTTAAAATCTCTGTCATACACAATAGCAGAAT 37081 >seq200 Length=575180 Score = 96.9 bits (106), Expect = 5e-15 Identities = 157/224 (70%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||||| || || || || || || || |||||||| ||||||||||| || Sbjct 474935 TCATCTCTAGAGATCAACTCATTGCTGAAGGTAAGTCCAGGCATGAGTCCACGCTTCTTC 474876 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || || |||||| ||||| |||||||| || || || || || Sbjct 474875 AGCCAGAATATGGAGGCAAAGCTTCCAGAGAAGAAAATGCCTTCGACGGCGGCAAAAGCC 474816 Query 46774 ACAAGTCTCTCTCCGTAACTGGC-ATCAT--TATGAATCCACCTTTGAGCCCAATCAGCC 46830 || | ||||| ||| | |||| || | | |||||| | ||||| || ||| Sbjct 474815 ACGATCCTCTCGCCGAAGGTGGCGGTCTTGCTCGCGATCCACTGCAGCGCCCAGTCTGCC 474756 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 || ||||| ||||| |||| || || || || || || || || Sbjct 474755 TTCTTCTTCACACATGGCAAAGTCTCAATGGCGTTGAACAGGAA 474712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712748404326720