Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq36 149 1e-30 seq158 122 2e-22 >seq36 Length=1647457 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || |||||||||||||| || ||||||||||| |||| | || | ||||| Sbjct 456266 AGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 456207 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || |||||||| | | ||||||||| | | || ||||| || ||| Sbjct 456206 TCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCT 456147 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| || ||| |||| | | |||| ||| ||| |||||||||||||||||| Sbjct 456146 TGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTT 456087 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || |||| |||||| Sbjct 456086 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 123 bits (136), Expect = 6e-23 Identities = 163/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || || || || || |||||||| || | || ||| | Sbjct 937527 GAGGCGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGATAGAGTGCG 937586 Query 151946 CCCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||||||||| ||||| ||||| || || || | |||||| || | | || ||| Sbjct 937587 CCCATCTTCTAACTGCTTT--CCGGCAAAAATGAGACGCTGCTGATCTGGAGGAATGCCT 937644 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||| ||||| || ||| | || | |||||||| ||| ||||| | | Sbjct 937645 TCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACTTCCAAA 937704 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || || | |||||| ||||||| ||||||||| Sbjct 937705 GTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCATTTT 937748 Score = 122 bits (134), Expect = 2e-22 Identities = 155/213 (73%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || |||||||| |||||||| ||||||||||| || | | || | ||||| Sbjct 456039 GAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGGCCATC 455980 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| | | ||||||||| | | || ||||| || || Sbjct 455979 CTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTC 455920 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || ||| || ||| ||| | |||| || || ||||| || ||||| || Sbjct 455919 TTGGATCTTTGCCTTTACATTCT---CAGTGTCAGATGGTTCCACTTCCAGTGTAATTGT 455863 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || |||||||| || ||||||| |||||| Sbjct 455862 TTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 120 bits (132), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || |||||||| ||||| || |||||||| ||||| | | || | || || Sbjct 455130 GAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCGTC 455071 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||||| ||||| || || ||||| || | |||||| || | | || |||||||| Sbjct 455070 TTCTAATTGCTTT--CCAGCAAAGATCAGTCGCTGCTGATCTGGGGGAATACCTTCCTTA 455013 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 ||||||||||| |||||| |||| | ||||||| ||| ||||| ||||| || Sbjct 455012 TCTTGAATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAACTTCGAGAGTGATG 454953 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 ||||| || || | || || ||||| | |||||| ||| Sbjct 454952 GTTTTACCAGTCAAGGTTTTTACGAAAATCTGCATCTTA 454914 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||||||| || | ||| ||||| |||||||| || ||||||||||| | | ||| | Sbjct 937299 GAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGACAGAGTGCG 937358 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||| ||||| |||||||| | |||||| || | | || ||||| Sbjct 937359 GCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGAATGCCTTC 937418 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || ||||| ||| ||| |||| | |||| || || ||||| || || Sbjct 937419 CTTATCCTGGATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCACTTCCAGTGT 937478 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || || ||||| || || | ||||| Sbjct 937479 GATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || |||||||| ||||| || ||||||||||| |||| | || | ||||| Sbjct 455358 GAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATC 455299 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| | | ||| ||||| | | || ||||| || || Sbjct 455298 CTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTGTC 455239 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | |||||||| ||| || ||||| || || || Sbjct 455238 TTGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACCTCAAGGGTGATTGT 455179 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || || ||||| || |||| |||||| Sbjct 455178 TTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || ||||| ||||||||||| | | || | ||||| || | Sbjct 455808 CAAG-TGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCGA 455750 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||||||||| | | ||||||||| | | || || ||||| ||||| | Sbjct 455749 GCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGA 455690 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| |||| | |||| || || ||||| || ||||||||||| | Sbjct 455689 TCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACTTCCAGTGTAATAGTTTTTC 455630 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | |||||||| || ||||||| |||||| Sbjct 455629 CAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || ||||| ||||||||||| | | || | ||||| || | Sbjct 455580 CAAG-TGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCCTCAA 455522 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||| ||||| | | ||||||||| | | || ||||| || ||||| | Sbjct 455521 GCTGTTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGGA 455462 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| |||| | |||||||| ||| || ||||| || || ||||| | Sbjct 455461 TCTTTGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACCTCAAGGGTGATGGTTTTAC 455402 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || || |||| |||||| Sbjct 455401 CTGTGAGGGTTTTGACAAAGATCTGCAT 455374 >seq158 Length=707457 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || ||||| ||||| |||||||| | | ||| | |||||||| | Sbjct 607283 CAAG-TGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGTACGGCCATCTTCCA 607225 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| || | ||| ||||||| | ||| ||||| || ||||| | Sbjct 607224 ACTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGAGGGATACCTTCTTTATCTTGGA 607165 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | | |||||||| ||| || ||||| || || || || | Sbjct 607164 TCTTAGCCTTCACATTTTCGATGGTGTCTGAAGCCTCCACCTCAAGGGTGATGGTCTTCC 607105 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| || || || ||||| | ||||||| Sbjct 607104 CCGTTAGGGTTTTGACGAATATCTGCATT 607076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153512257140441