Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq36 140 3e-28 >seq36 Length=1647457 Score = 140 bits (154), Expect = 3e-28 Identities = 173/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||||| || || || ||||||||| |||||||| || ||| Sbjct 455144 CCACCGCGCAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGAG 455085 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || | ||||| || || || ||||| ||||| || || | |||| Sbjct 455084 AGGGTGCGGCCGTCTTCTAATTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCTGGGGGA 455025 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | ||| |||| |||| ||| | | |||||| || ||| || Sbjct 455024 ATACCTTCCTTAT-CTTGAATTTTAGCTTTGACGTTCTCAATAGTGTCTGACGGCTCAAC 454966 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATC 41868 || | || || |||||||| |||| || ||||||||||||||||| ||||| Sbjct 454965 TTCGAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAAATCTGCATCTTATC 454912 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || |||| || | ||||| || ||||| || || || |||||||| Sbjct 935535 GCCGCCGCGAAGTCGTAGTACTAAATGCAAAGTAGATTCCTTTTGGATATTGTAGTCGGA 935594 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || || |||| ||||||||||| ||||| || || || ||||| || |||| || Sbjct 935595 GAGAGTACGGCCGTCCTCGAGCTGCTTACCGGCAAAGATAAGTCGCTGCTGATCCGGAGG 935654 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCA 41813 || || ||||||||| ||| |||| || | ||| | | ||||| | ||||| Sbjct 935655 AATGCCTTCCTTGTCC-TGAATTTTGGCCTTAACATTCTCAATTGTGTCAGAAGGCTCCA 935713 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || ||||||||||| ||||||||||| ||||| || ||||| Sbjct 935714 CTTCAAGTGTGATCGTTTTACCGGTCAGCGTCTTAACGAATATTTGCAT 935762 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||||| || || || ||||||||| ||||| ||||||||| Sbjct 456281 CCACCGCGAAGACGAAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 456222 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||| ||||| ||||| |||| ||||| ||||| | |||| Sbjct 456221 AGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 456162 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || || ||||| ||| ||| ||| | | | ||||| | ||| || Sbjct 456161 ATGCCTTCTTTGTCTTGGATCTTTGCCTTTACATTCTCAATGGTGTCAGAAGGCTCAACT 456102 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || ||||| || || |||||||| Sbjct 456101 TCAAGAGTAATAGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 456055 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| ||| ||||| |||||||| || || || Sbjct 455828 CCACCACGCAGACGAAGTACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAATCAGAA 455769 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||| ||||||||||| |||| ||||| ||||| | |||| Sbjct 455768 AGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455709 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||||||| ||| || ||| | | | |||||| | ||||| Sbjct 455708 ATGCCCTCCTTGTCTTGGATCTTAGCCTTTACATTCTCAATAGTGTCAGATGGTTCCACT 455649 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| || || || || || ||||| |||||||| Sbjct 455648 TCCAGTGTAATAGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455602 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||||||||| ||||| |||||||| Sbjct 455372 CCACCACGAAGACGGAGCACCAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAA 455313 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||| ||||||||||| |||| ||||||||||| | |||| Sbjct 455312 AGGGTACGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGA 455253 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || || ||||| ||| || ||| | | |||||| | ||| ||| Sbjct 455252 ATGCCTTCTTTGTCTTGGATCTTGGCCTTTACATTTTCAATAGTGTCTGAAGGCTCAACC 455193 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || ||||| || || |||||||| Sbjct 455192 TCAAGGGTGATTGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 455146 Score = 114 bits (126), Expect = 1e-20 Identities = 162/227 (71%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||| ||||| ||||| ||||| || Sbjct 456053 CCACCACGCAGACGGAGCACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCTGAA 455994 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||| ||||||||||| |||| ||||| ||||| | |||| Sbjct 455993 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 455934 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || || ||||| ||| ||| ||| | | ||||||| | ||||| Sbjct 455933 ATGCCTTCTTTGTCTTGGATCTTTGCCTTTA---CATTCTCAGTGTCAGATGGTTCCACT 455877 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| || || || || || ||||| |||||||| Sbjct 455876 TCCAGTGTAATTGTTTTTCCAGTGAGAGTTTTAACGAAGATCTGCAT 455830 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||| || || ||| |||||||||||||| ||||| || Sbjct 937519 CCACCGCGGAGGCGGAGCACCAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCTGAT 937578 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || | |||||| ||||| || || || ||||| || || | ||| Sbjct 937579 AGAGTGCGCCCATCTTCTAACTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGAGGA 937638 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || || ||||| |||||| ||||| | |||||| | ||| || Sbjct 937639 ATGCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCAACT 937698 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| || || ||||| || || | ||||||||||| |||||||| || Sbjct 937699 TCCAAAGTGATAGTTTTCCCAGTTAAAGTCTTTACGAAGATCTGCATTTT 937748 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || | | || | |||||| ||| ||| ||||||||||| || || || Sbjct 937291 CCACCGCGGAGTCTGAGTACTAAATGCAGAGTGGACTCTTTCTGAATGTTGTAATCTGAC 937350 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||| || ||||| || || || ||||| || || | ||| Sbjct 937351 AGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATAAGTCGCTGCTGATCTGGAGGA 937410 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| || |||| |||| ||| | | ||||| | ||||| Sbjct 937411 ATGCCTTCCTTATCC-TGGATTTTAGCTTTAACATTCTCAATTGTGTCCGATGGTTCCAC 937469 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| || ||||||||||| || ||||| ||||| Sbjct 937470 TTCCAGTGTGATTGTTTTGCCAGTCAGCGTCTTGACAAAAATTTGCAT 937517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462183390665200