Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AC_000014.1 Length=43804 Score E Sequences producing significant alignments: (Bits) Value seq180 84.2 6e-12 >seq180 Length=2402523 Score = 84.2 bits (92), Expect = 6e-12 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1016 TACGGTCGGATTGCTCCTCGCTCGGGCTTGGCCGCCAAATTTTTCATTGACGTCGGAGCG 1075 || ||||| |||| ||||| || || ||||| ||| ||||||||| || ||||| Sbjct 841318 TATGGTCGTGTTGCACCTCGATCTGGTTTGGCTTGGAAAAATTTCATTGATGTTGGAGCC 841259 Query 1076 GGTGTTATCGATCCCGATTACCGCGGGAACGTTAGCGTGGTTTTGTTCAATTTCTCCGA 1134 ||||| ||||||| ||||||||||| || ||| | || |||| |||||| ||||| Sbjct 841258 GGTGTCATCGATCAAGATTACCGCGGCAATGTTGGTGTTATTTTATTCAATCATTCCGA 841200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140010495431700