Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq193 86.0 5e-12 >seq193 Length=1219868 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| |||||| || || || ||||||||||||||||| | Sbjct 521459 CCACCACGAAGACGGAGAACCAAATGCAATGTTGATTCTTTTTGAATGTTATAGTCGCTC 521518 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | |||| || | |||||| || || |||| | | ||| || || || Sbjct 521519 AAAGTACGACCGTCTTCTAACTGTTTACCGGCGAAAATCAAACGCTGTTGATCTGGTGGA 521578 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| |||||| || || | | | || || || || | Sbjct 521579 ATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGTTCAACT 521638 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || || ||||||||||| |||||||| Sbjct 521639 TCCAATGTGATGGTCTTGCCAGTCAATGTTTTGACAAAGATTTGCAT 521685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422133244699100