Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq33 145 6e-30 >seq33 Length=1400293 Score = 145 bits (160), Expect = 6e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20430 CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489 |||||| ||||||||| | |||| | || |||||| ||||||| || || || ||||| Sbjct 741779 CCAATTCTACGTTGCTGACGGTGAACTATCATGTCAATTGTATCAGCGGTCAGCCGATAT 741720 Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||| | ||||| || |||||||||||||| ||||| | || || |||||||| || Sbjct 741719 GGGTTTAGGTGTACCATTCAATATTGCAAGCTATGCTTCATTGACATACATGATTGCTCA 741660 Query 20550 TGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCT 20609 |||||| | || ||| | || || || |||| || || || || || ||| |||| || Sbjct 741659 TGTTACTGGCTTGAAACCAGGCGATTTCATCCATACAATTGGCGATGCTCATGTTTATCT 741600 Query 20610 TAATCATATAGAACCTTTAAAATTACAGTTAAC 20642 |||||||| ||||| ||||| |||| |||| Sbjct 741599 CAATCATATTGAACCATTAAAGCAACAGGTAAC 741567 Score = 111 bits (122), Expect = 1e-19 Identities = 298/449 (66%), Gaps = 9/449 (2%) Strand=Plus/Minus Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037 ||||| |||||| || || |||| ||||||| || ||| || || || Sbjct 742332 GATCGTACCGGAGTCGGTACCGTATCGATATTTGGTGCTCAGATGAGATTCAATTTACGA 742273 Query 20038 AATGAA---TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAG 20094 ||||| ||||| || ||||| || ||||| ||||||||| | ||| | ||||| Sbjct 742272 AATGATATCTTTCCGTTGTTAACAACTAAACGAGTATTTTGGCGTGCCGTCCTGGAAGAA 742213 Query 20095 TTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAG 20154 || || ||||| || ||||| |||||| | | || | ||| || || | Sbjct 742212 TTGTTGTGGTTCATCAAAGGCAGTACAAATGCAAAGGAATTACAAGACAAGAATATTCAC 742153 Query 20155 ATTTGG-AGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCA 20213 |||||| | ||| || | | ||||| | | | ||||| ||| | | ||| | Sbjct 742152 ATTTGGGATGGCA-ATAGCACACGTGAATTTCTCGATAAAAATGGTTTTCATGATCGTGA 742094 Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT 20273 |||||| |||||||| || || ||||| ||||||||| |||||||||| |||||||| Sbjct 742093 AGAGGGCGATTTGGGACCGGTTTATGGTTTTCAATGGCGACATTTTGGCGCTGAATACAA 742034 Query 20274 TGACATGAACACAA--ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAAT 20331 ||||| || | ||||| || ||||| | |||||||| | | ||||| ||| Sbjct 742033 A-ACATGT-CATGACGATTATACCGGCCAAGGCATTGATCAATTGAATGAAGTTATCAAT 741976 Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391 ||| || || || || || | ||||||| | |||| ||||| | | ||| Sbjct 741975 CGTATTCGTACCAATCCTAATGATCGTCGAATTATCATGAGCGCTTGGAATGTTGTTGAT 741916 Query 20392 GTGCCTTTAATGGCTTTGCCTCCATGTCA 20420 | || ||||||| | ||||||||||| Sbjct 741915 ATCCCGAAAATGGCTCTACCTCCATGTCA 741887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399064927778875