Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq2697 136 9e-28 >seq2697 Length=510 Score = 136 bits (150), Expect = 9e-28 Identities = 260/377 (69%), Gaps = 21/377 (6%) Strand=Plus/Plus Query 26451 TTCTCAACGGGC----AAAAGAAGTGCCTGCGTGGCGAAGCCCACCGCGCAGCCGTGTTG 26506 |||||||||| | ||||| ||| || || || || ||||| ||||| || || Sbjct 76 TTCTCAACGGTCGTCGAAAAG----GCCGCCGGGGGGAGGCACACCGTGCAGCGGTACTG 131 Query 26507 CTCGGGATCAAGGACGGAGTAATTGCACAGTAATGGCCACCAGCTTTGAGAGAC--ACCA 26564 || || ||||| ||||| || || | | | ||| |||||| || | || || |||| Sbjct 132 CTAGGTATCAAAGACGGCGTGATCGAAGAATAA-GGCCACTGGCCATTAGGGATGAACCA 190 Query 26565 GAAGATGAAACGCCCGCTCCTAGAAACGCGGC--GCCAGGTGGTCAGCGCGATCATCGGC 26622 ||| ||||| ||| | | || | || || ||| ||||| |||||||||||| || Sbjct 191 GAACATGAATCGCTCAGTTCTCAAGACAAGGAAAGCC--GTGGTTAGCGCGATCATCCGC 248 Query 26623 GCCTACCCTGGCGGACGCGAATGCGCCGCCGCCCGCCTGGGCCTCGACCTGAAGAAGTTC 26682 || ||||| || || || | || || |||| ||| |||||||| || ||||||||| Sbjct 249 GCATACCCGGGTGGCCGGGCCCAAGCTGCTGCCCACCTCGGCCTCGAGCTCAAGAAGTTC 308 Query 26683 GACAACCACGCCTACGAGAACGCCGGCAGCAAACCGCTCAGCGACGACCAGTTGCTCCTG 26742 ||||||||||||||||| ||| | | | ||||||| |||| ||| | || | Sbjct 309 GACAACCACGCCTACGAAAACAACAACGCCCGCCCGCTCAACGACCTGCAGCTCTGCCAG 368 Query 26743 CTCGAGCAGGAAACCG---GCACCAGCCACTTCCCCGAGTATGTCGCCCACCTATACGGC 26799 || | ||| |||| |||||| | | ||||||| |||| || |||||| Sbjct 369 CT---GGAGGCCACCGCGCGCACCACGTTCCTGCCCGAGTTCATCGCTTCGCTGTACGGC 425 Query 26800 GGCATGTTCGTGCAGAT 26816 || || |||||| |||| Sbjct 426 GGAATTTTCGTGAAGAT 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113701344162900