Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18]
24,475 sequences; 185,827,756 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq6116 176 5e-39
seq193 136 4e-27
seq17930 131 2e-25
seq317 125 7e-24
seq29 118 1e-21
seq28 116 4e-21
>seq6116
Length=1078
Score = 176 bits (194), Expect = 5e-39
Identities = 479/725 (66%), Gaps = 15/725 (2%)
Strand=Plus/Plus
Query 156494 TTGACAACTTGAAATTCGCCCGACAAAACACGTC--TCAAAAACAAATTACTGTGAAACG 156551
||||| ||||||||||| || || |||||||| | | ||| | | |||| | ||
Sbjct 258 TTGACCACTTGAAATTCACCGGATAAAACACGACGATTGTAAATGTTTGA-TGTGTA-CG 315
Query 156552 GTTCAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCA 156611
| |||||||| |||||||| || ||||| || || |||| || |||||| || |
Sbjct 316 GCTCAAATGATTCGTTGTTACCAAGGATTTGAGCCGTGCTGGCGGTAGGCATGGGTGCAA 375
Query 156612 CAAGCAATGAATTACGTAATCCGTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCC 156671
||||||||||| || | || | || || || |||||| | | ||| | ||
Sbjct 376 GTAGCAATGAATTTCGGACACCATGTTGGGCGATTTTCCCTTTCAATTCAGTCCAATTCC 435
Query 156672 ATAACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGC 156731
||| ||| ||| | ||||||| ||| ||||| | || |||| ||| ||
Sbjct 436 ATAGATCAGTTGGTGTTTTGTTCCACATATCATATTGTAGAATACCTTTGCTGACTGGTG 495
Query 156732 TACCGGCAAACGTGCTATAAGGCTC-ACTAACAGATGCCAGTTCGTAACTGGCCTCGAGC 156790
|| ||| | || || || | | | | |||| ||| | ||||| || |
Sbjct 496 ACCCCGCATATGTTTCGTATGGGCCGAATTTTTCA-GCCAATTCACAGCTGGCTTCCAAT 554
Query 156791 GCAGCATGATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACG 156850
||| ||| ||| | ||||| |||||||| ||||| | || | || || |
Sbjct 555 GCACCATAATAAATGGTTTCGAAAATTTGTTGATTCATTTGAGCCGCCTGTGGACTTTCA 614
Query 156851 TACGGTATGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCAATGCCGATGGGA 156910
|| || |||| || || || |||||||||||||||||||| ||||| || ||||||
Sbjct 615 TATGGATAACGCATCAAAATGAACGCATCGGCCAAACCTTGAATACCAATTCCAATGGGA 674
Query 156911 CGATGGCGCATATTAGAtttttttGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATT 156970
||||| || |||| ||||||| ||| | || || ||||| ||| ||||||
Sbjct 675 CGATGTCGTTTATTCGATTTTTCTGCCTCGGGCAACGGATAATAATTGACATCGATAATT 734
Query 156971 TTATTCAAA---CTATCCACTACATGTTTGACCACAGTGTGCAATAGTTGAAAATCAAAA 157027
|| |||||| || || || | | ||| | | |||| ||||||||||||
Sbjct 735 TTGTTCAAATTTCTGGTAACGACTTTTGTGATGTC---TTTCAATTTTTGAAAATCAAAT 791
Query 157028 GTATCATTAT---TGATATATTTATTGACGGCAATCGACGCTAGATTACATACGGCAGTT 157084
|| | || | ||| | | |||| || |||||||| || | |||||| || ||| |
Sbjct 792 GTTTTGTTTTGTGTGACAAACATATTAACAGCAATCGAGGCCAAATTACAAACAGCAACT 851
Query 157085 TCGTCGGGCGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCG 157144
|| || || |||| || ||||| | ||| ||||| || ||| || ||
Sbjct 852 TCATCTTTGTCGGTGTATTCAACGATTTCAGTACATAAATTACTACATCGGATAGTGCCA 911
Query 157145 CAATTACTTTGATTGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCG 157204
||| ||||||||| || |||||||| || || ||||| || ||||||||||||||
Sbjct 912 AGATTCTGTTGATTGCTCTTTCGGTTGCATGCATCTTTGTACAAGATGTACGGTGTGCCT 971
Query 157205 GTTTC 157209
|||||
Sbjct 972 GTTTC 976
>seq193
Length=1219868
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | |||||| || ||||| | ||| ||||| || || |||||||| ||||||
Sbjct 521231 CCACCACGAAGACGCAAGACCAAATGCAATGTTGATTCCTTCTGAATGTTGTAGTCGCTC 521290
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | |||||| | ||||||||| || | |||| ||| || ||||| || ||
Sbjct 521291 AATGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGCTGTTGATCTGGTGGA 521350
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || || | | ||| | ||||| | ||||| |||
Sbjct 521351 ATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCGATGGTGTCTGATGGTTCAACT 521410
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | |||||||| ||||||||||| || || |||||||||
Sbjct 521411 TCCAAAGTGATGGTCTTGCCAGTCAATGTTTTGACAAAAATTTGCATA 521458
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | |||||| || ||||| | || ||||||||||| |||||||| ||||||
Sbjct 521003 CCACCACGAAGACGCAATACCAAATGCAAAGTTGATTCTTTTTGAATGTTGTAGTCGCTC 521062
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | ||||||||||||| | |||| ||||| ||||| || ||
Sbjct 521063 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAAATCAATCGTTGTTGATCTGGTGGA 521122
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| || || || | | ||| | ||||| | ||||| |||
Sbjct 521123 ATACCCTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCGATGGTGTCTGATGGTTCAACT 521182
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || ||||| ||||||||||| || || |||||||||
Sbjct 521183 TCCAAAGTGATGGTTTTGCCAGTCAATGTTTTGACAAAAATTTGCATA 521230
Score = 123 bits (136), Expect = 3e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| ||||| | ||| ||||||||||| ||||| || ||||||
Sbjct 521459 CCACCACGAAGACGGAGAACCAAATGCAATGTTGATTCTTTTTGAATGTTATAGTCGCTC 521518
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | |||||| | |||||||| || | |||| ||| || ||||| || ||
Sbjct 521519 AAAGTACGACCGTCTTCTAACTGTTTACCGGCGAAAATCAAACGCTGTTGATCTGGTGGA 521578
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || || | | ||| | ||||| | ||||| |||
Sbjct 521579 ATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGTTCAACT 521638
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | |||||||| ||||||||||| || || |||||||||
Sbjct 521639 TCCAATGTGATGGTCTTGCCAGTCAATGTTTTGACAAAGATTTGCATA 521686
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| ||||| | ||| ||||| ||||| || || || ||||||
Sbjct 520061 CCGCCACGAAGACGAAGAACCAAATGCAATGTTGATTCCTTTTGGATATTATAGTCGCTC 520120
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| | ||| || || ||| | |||| ||| || ||||| || ||
Sbjct 520121 AATGTACGGCCATCTTCCAATTGCTTGCCGGCAAAAATCAAACGCTGTTGATCTGGCGGA 520180
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||||| || | | ||| | ||||| | ||||| ||
Sbjct 520181 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGATGGTTCAACC 520240
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || || |||||||||||||| ||||| |||||||||
Sbjct 520241 TCCAAAGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 520288
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | |||||| || ||||| | || ||||||||||| ||||| || ||||||
Sbjct 521687 CCACCACGAAGACGCAATACCAAATGCAAAGTTGATTCTTTTTGAATGTTATAGTCGCTC 521746
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | ||||||||| ||| | |||| ||| || || || || ||
Sbjct 521747 AAAGTACGACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGCTGTTGGTCTGGTGGA 521806
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || || | | ||| | ||||| | ||||| ||
Sbjct 521807 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGTTCGACC 521866
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | || || |||||||||||||| || || ||||||||
Sbjct 521867 TCCAAAGTGATGGTTTTTCCGGTCAATGTTTTCACAAAAATTTGCAT 521913
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| ||||| | ||| ||||||||||| ||||| || |||
Sbjct 520566 CCACCACGAAGACGGAGAACCAAATGCAATGTTGATTCTTTTTGAATGTTATAGTCGGAT 520625
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| |||||| | |||||||| || | |||| ||| || ||||| || ||
Sbjct 520626 AAAGTGCGACCGTCTTCTAACTGTTTACCGGCGAAAATCAAACGCTGTTGATCTGGTGGA 520685
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || || | | ||| | ||||| | ||||| |||
Sbjct 520686 ATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGTTCAACT 520745
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | || || || ||||||||||| || || |||||||||
Sbjct 520746 TCCAATGTGATGGTTTTTCCAGTCAATGTTTTGACAAAGATTTGCATA 520793
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | |||||| || ||||| | || ||||||||||| |||||||| ||||||
Sbjct 520289 CCACCACGAAGACGCAATACCAAATGCAAAGTTGATTCTTTTTGAATGTTGTAGTCGCTC 520348
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | ||||||||||||| | |||| ||||| ||||| || ||
Sbjct 520349 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAAATCAATCGTTGTTGATCTGGTGGA 520408
Query 143078 ATGCCTTCTTTGTC 143091
|| || ||||||||
Sbjct 520409 ATACCCTCTTTGTC 520422
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | |||||| || ||||| | || ||||||||||| ||||| || ||||||
Sbjct 520794 CCACCACGAAGACGCAATACCAAATGCAAAGTTGATTCTTTTTGAATGTTATAGTCGCTC 520853
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | ||||||||||||| | |||| ||||| ||||| || ||
Sbjct 520854 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAAATCAATCGTTGTTGATCTGGTGGA 520913
Query 143078 ATGCCTTCTTTGTC 143091
|| |||||||||||
Sbjct 520914 ATACCTTCTTTGTC 520927
>seq17930
Length=2109152
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | |||||| || ||||| | ||| ||||| ||||| || ||||||||| |
Sbjct 1835534 CCACCACGAAGACGCAATACCAAATGTAATGTTGATTCCTTTTGGATATTGTAATCGGAC 1835475
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| | ||||||||| ||| | |||| |||||| || || || ||
Sbjct 1835474 AATGTACGGCCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGGTCTGGTGGA 1835415
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||||||||| ||||| || | | ||| | ||||| | || || |||
Sbjct 1835414 ATGCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCGATTGTGTCGGATGGCTCGACT 1835355
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||||||||| | ||||| ||||| ||||||||
Sbjct 1835354 TCAAGTGTGATAGTCTTGCCGGTTAGAGTTTTAACGAAAATTTGCAT 1835308
>seq317
Length=2337800
Score = 125 bits (138), Expect = 7e-24
Identities = 537/825 (65%), Gaps = 29/825 (4%)
Strand=Plus/Plus
Query 50044 TTTTGGCGAATGGAAGAGGTTGATTTATCAAAGGACTATGACGACTTTCAACT-TAAATT 50102
|||||| | | ||||| ||||| || ||||||| |||| || ||| |||| |
Sbjct 1452610 TTTTGGACAGTTGAAGAAGTTGACTTGACAAAGGA-TATGGATCATTGGAACAATAAAAT 1452668
Query 50103 AAACAATGACCAGCGTCATTTCATCATGCACGTGTTGGGttttttttCGGCCGCCGATTC 50162
||| | || | ||| ||||||| | ||| ||||||| |||||| | || |||||
Sbjct 1452669 GAACGAAGATGAACGTAATTTCATAAAGCATGTGTTGGCCTTTTTTGCTGCATCCGATGG 1452728
Query 50163 GATTGTCAACATCAACGTTCTGGATTACATGTTG--CAAACGGTGCCGG-AACTCGAGGC 50219
|| ||||| || | | || || | || ||| ||| | | |||| ||
Sbjct 1452729 CATCGTCAATGAAAATTTAGTTGA--ACGTTTTAGCCAAGAGGTTCAAGTAACTGAAGCA 1452786
Query 50220 CGTGTATTTTTACACATTTCAAGCGGCCATGGAAAATGTTCACACACAAATGTACGGAAC 50279
||| | |||| | |||||| |||||| |||||||| ||| | |||||||| |
Sbjct 1452787 CGTTTCTTTTATGGC-TTTCAAATGGCCATTGAAAATGTGCACTCTGAAATGTACAGTCT 1452845
Query 50280 GTTAATTATTACATTGATTC-CG-GACAAAAAGCAACAAGACTTAATACTCAACGCTTTC 50337
||||| | ||| | || | || ||| | | ||| | || | | || || ||
Sbjct 1452846 ATTAAT-ACAACAGT-ATGCACGTGACGATGAAGAACGTAATTTTTTGTTTAATGCCATC 1452903
Query 50338 GATAATATTTCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaa 50397
|| | | | ||||| || |||| |||||||||||| |||||| | | ||||
Sbjct 1452904 GAAACGTTGCCATGTGTTAAAAAGAAGGCCGATTGGGCATTACAATGGATTGGCAGCAAA 1452963
Query 50398 aaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCC 50457
| || || | |||||| | || || ||||| |||||||| | |||||| |
Sbjct 1452964 ACGGCCACATTTGGTGAACGTGTTGTTGCATTTGCAGCTGTTGAAGGGATTTTTTTTAGC 1453023
Query 50458 GGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTT 50517
|||||||||||| | || |||| | |||| || |||||||||| | || |||
Sbjct 1453024 GGTAGCTTTGCATCTATTTTTTGGTTGAAAAAACGTGGTCTAATGCCCGGTTTAACATTT 1453083
Query 50518 AGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTT-GTACTA 50576
||| || || ||||| || || || || ||||| || ||||| ||||| | |
Sbjct 1453084 TCCAATGAATTAATTTCACGTGATGAGGGCATGCATTGTGATTTTGCATGTTTAATGTTT 1453143
Query 50577 CAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGC 50636
|||| | ||| ||||| |||| | ||| | | || | |||||
Sbjct 1453144 AAATATG-TTGTA---CAAAAACCATCACAAGAACGTGTACGCAATATTATTGCTGAAGC 1453199
Query 50637 CGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAA 50696
|| ||| ||||| || ||||| |||| || || || || || |||||||||||||
Sbjct 1453200 GGTTCGCATTGAAAAGGAATTTTTAACGGTTGCATTGCCAGTTTCAATGTTGGGCATGAA 1453259
Query 50697 ---CGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCT 50753
|| || ||| ||| | ||||||||| |||||||| || | |||||| | |
Sbjct 1453260 TTGTGCTGATATG-TGTAC--GTACATTGAATTTGTTGCCGATCGTTTGTTGAGCGAATT 1453316
Query 50754 GGGACAACCGAAATACTA-TAATG--CACGTAACCCCTTTCCGTTTATGAATAACATATC 50810
||| |||| | || | ||| || | || || ||| |||||| | ||||| ||
Sbjct 1453317 GGG--CTGCGAACCATTATTCATGGTCAAG-AATCCATTTAAATTTATGGAAAACATTTC 1453373
Query 50811 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA 50855
|| | |||||||| || || || |||| |||||| ||||||||
Sbjct 1453374 ATTACAAGGCAAAACTAATTTCTTTGAAAAACGTGTCGGCGAATA 1453418
>seq29
Length=2096867
Score = 118 bits (130), Expect = 1e-21
Identities = 691/1089 (63%), Gaps = 48/1089 (4%)
Strand=Plus/Minus
Query 156143 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 156202
|| |||||||| | ||| || || || | ||||| ||||| ||||| || ||||||
Sbjct 938192 ACAGTAAATTGAATTGGATTTGCGGCTGGTCGAGTGCGCAAATAATACATTCCTGTTTTG 938133
Query 156203 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTTGCC 156262
|| ||| ||||| | || | || | ||| | |||||| | | || || | |||
Sbjct 938132 AGACCGGCTTTCCATGCATAAAAATGAATCGAAGTCATTTTTGCGTATGTTGGTTCGGCC 938073
Query 156263 ATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTCA 156322
| | || ||||||||||||||||||||||| || || |||| || || ||||| |
Sbjct 938072 ACATGCAAATTGAACGATTGACTTTGATCGATGAACGCACCCCGATCAGCAGCCATATTG 938013
Query 156323 ATCATATATTTTCCATTGTTCTCCCAAATTTCCCAGATTGTCATGTACA----GCTTTTT 156378
|| | | || || | | |||||||| | || |||| | || ||
Sbjct 938012 ATGGT-TGTT--------TTAACAGATATTTCCCAAACGGTTTTGTATAAATCGCGAATT 937962
Query 156379 TAGATTGTCGGGAATTTTGGCGATAGAAGCTATCGATCCTCTGTTTGCCATGATT--GTT 156436
| |||| |||||| | |||| || || || | || |||||| |||
Sbjct 937961 T--CTTGT--GGAATTCGTGTGATATTTTGAATTGAACCATAATCGGCAATGATTTCGTT 937906
Query 156437 TTTCGCATACTATTTGTATAGAGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTTG 156496
||| ||| || | | || | || | | | ||| | || || | | |||
Sbjct 937905 TTT--CATGTCATCGTCCCACATATCGATTTCGGTCAAATCTTTGATCAGATGATGATTG 937848
Query 156497 ACAACTTGAAATTCGCCCGACAAAACACGTC--TCAAAAACAAATTACTGTGAAACGGTT 156554
|| ||||||||||| || || | |||||| | | | ||| | || |||| || ||||
Sbjct 937847 ACCACTTGAAATTCACCGGAAAGAACACGGCGATTATAAA-TATTTGATGTGTAA-GGTT 937790
Query 156555 CAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAA 156614
| ||||| || |||||| ||| ||||| || || | || |||||||| || | |
Sbjct 937789 CGAATGATTCATTGTTGCCGAGAATTTGAGCCGTACTAGCTGTCGGCATTGGAGCGAGTA 937730
Query 156615 GCAATGAATTACGTAATCCGTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATA 156674
|||||||| |||| || | ||| || || |||| || | ||| | |||||
Sbjct 937729 ATAATGAATTTCGTACACCATGTTTAGCAATTTTCGTTTTTAATGCAGCCCAATTCCATA 937670
Query 156675 ACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCT-CGCTTTGCTA 156733
| || || | ||||||| ||||||||| || | |||| ||| | || |
Sbjct 937669 AATCGGTTGGCGTTTTGTTCCACATATCGTATTGTAAAACACCTTTGCTAACCGGTGAT- 937611
Query 156734 CCGGCAAACGTGCTATAAGGCTCACTAACAGATGCCAGTTCGTAACTGGCCTCGAGCGCA 156793
|| || | || ||| ||| || || |||| ||| |||| || || | |||
Sbjct 937610 CCATCATATGTTTCATATGGCCCATCAATCTCGGCCAATTCACAACTAGCTTCCAAGGCA 937551
Query 156794 GCATGATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTAC 156853
||| || | ||||| |||||| | ||| | | | || |||| || | ||
Sbjct 937550 CCATAGTAAATCGTTTCGAAAATTTGCTGATTTAGTTTCATTGCCTCATCACTTTCATAT 937491
Query 156854 GGTATGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCAATGCCGATGGGACGA 156913
|| || |||| || || ||||||||||| ||||||||||| |||||||| | || |||
Sbjct 937490 GGAATTCGCATCAAAATGAATGCATCGGCTAAACCTTGAATTCCAATGCCAACCGGCCGA 937431
Query 156914 TGGCGCATATTAGAtttttttGCAGTTT----CAATAGGGTAGAAATTGCGATCAATAAT 156969
|| || | || || || ||| || |||| || || | || |||||| ||
Sbjct 937430 TGACGTTTGTTGGAACGTT---CAGCTTCGGGCAAT-GGATAATAGTTAACATCAATGAT 937375
Query 156970 TTTATTCAAACTATC----CACTACATGTTTGACCACAGTGTGCAATAGTTGAAAATCAA 157025
||| |||| | | || || || | | ||| | | ||| | ||||||
Sbjct 937374 TTTGTTCAGA-TTTCGTGTAACGACTTTTGTGATTTC---TTTCAACTTATCAAAATCGT 937319
Query 157026 AAG---TATCATTATTGATATATTTATTGACGGCAATCGACGCTAGATTACATACGGCAG 157082
| | | || | | | | | || ||||| ||||| || | |||||| || |||
Sbjct 937318 ATGTTTTGTCTGCGGTTACAAACATGTTAACGGCTATCGATGCCAAATTACAAACAGCAA 937259
Query 157083 TTTCGTC-GGGCGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAAT 157141
|||| || | | | | ||| || ||||| | ||| ||||| ||||||| ||
Sbjct 937258 TTTCATCAGAACTTGTGA-ATTCAACAATTTCGGTACATAAATTACTGCATTGAATGGTA 937200
Query 157142 CCGCAATTACTTTGATTGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTG 157201
|| || ||| || ||||| || ||||| ||||| ||| |||||||||| |||||
Sbjct 937199 CCAAGGTTCTGTTGGTTACTTTTACGATTGCAGGCGTCTTTGAATAACATGTATGGTGTT 937140
Query 157202 CCGGTTTCG 157210
|| ||||||
Sbjct 937139 CCAGTTTCG 937131
>seq28
Length=2173237
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| ||||| | ||| ||||| ||||| |||||||| ||| |
Sbjct 1270005 CCACCACGAAGACGGAGAACCAAATGGAGTGTTGATTCCTTTTGAATGTTGTAGTCGGAC 1269946
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| | ||||||||||||| |||| | |||||| ||||| || ||
Sbjct 1269945 AATGTACGACCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGTGGA 1269886
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||||| || | | ||| | ||||| | ||||| |||
Sbjct 1269885 ATTCCTTCCTTGTCTTGGATTTTGGCCTTGACATTTTCGATAGTGTCTGACGGTTCGACT 1269826
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | ||||| || || | ||||| ||||| || |||||
Sbjct 1269825 TCGAGAGTGATAGTCTTACCCGTGAGGGTTTTAACGAAAATCTGCAT 1269779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506859285282000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |