Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq10355 224 2e-54 >seq10355 Length=764 Score = 224 bits (248), Expect = 2e-54 Identities = 276/373 (74%), Gaps = 3/373 (1%) Strand=Plus/Minus Query 19376 CTACGCAAACAGGCGCGCCAGC-TCGGCGACAATACCGCCGCCTCGGCGGATGATGCGGC 19434 || |||| ||||||||| ||| |||| || || || ||||| ||||| | ||||| || Sbjct 397 CTGCGCACGCAGGCGCGC-AGCATCGGTGATAACACAGCCGCATCGGCCAACGATGCCGC 339 Query 19435 CGGTGCACAGATAATCATCGCGAAAGCGGGTGGGGATGTTGATGCCATTCAGGCGGCAAC 19494 || ||||| || ||||| ||| |||| || || || | ||| |||||||||| Sbjct 338 GCAGGCGCAGATCATTATCGCTAAATCGGGCGGTAGCGTGGACGACATCAAGGCGGCAAC 279 Query 19495 GCCGGTCACGCTGAATATGGCGCTGGCGAACCGCCGCACGATGGAAGAAAACGCCGCCCT 19554 ||| || |||||| ||||| ||||||| ||| |||||||||||||||| |||| | || Sbjct 278 GCCAGTGACGCTGGATATGTCGCTGGCAAACAATCGCACGATGGAAGAAAGCGCCTCGCT 219 Query 19555 GCTGATGGGGATGAAATCCGCCTTTCAGCTTTCAAACGATAAGGTCGCTCATATCGGGGA 19614 ||||||| | | ||| ||||||| || | ||| |||| || ||| |||| || Sbjct 218 GCTGATGAGTACCAAAAACGCCTTTGGCCTGGCTAACAGCGAGGTGGCCCATCTCGGCGA 159 Query 19615 TGTTCTCTCCATGACGATGAACAAAACCGCCGCCGATTTTGACGGCATGAGCGATGCGCT 19674 || || | ||| ||||||| |||||||| | ||||||||| ||||||||||||| Sbjct 158 CGTGATCAGCGCAACGCTGAACAAGACCGCCGCAAACTTTGACGGCCTGAGCGATGCGCT 99 Query 19675 GACCTATGCCGCACCTGTGGCAAAAAATGCCGGTGTCAGCATTGAAGAAACCGCCGCAAT 19734 |||||| |||||| ||||| |||| || || |||||| | || | ||| ||||||| Sbjct 98 GACCTACATCGCACCAGTGGC-GAAAACGCGGGCGTCAGCGTCGAGCAGACCACCGCAAT 40 Query 19735 GGTCGGGGCGCTG 19747 | | || || ||| Sbjct 39 GATTGGCGCACTG 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98179456765500