Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_005882.1 Length=36748 Score E Sequences producing significant alignments: (Bits) Value seq18993 102 2e-17 >seq18993 Length=972 Score = 102 bits (112), Expect = 2e-17 Identities = 265/400 (66%), Gaps = 8/400 (2%) Strand=Plus/Minus Query 15267 GGACTTCGGACGGACTGGCGACCTGACGGTCCACGTGCCGCTGATCGAACAACAGAACCT 15326 |||||||| || |||||||||| ||||| |||| || || | | ||||| || Sbjct 797 GGACTTCGCTCGCTCTGGCGACCTCTCGGTCATTTGGCCGTTGCTCAAGGAGCAGAATCT 738 Query 15327 GGTTCGCCGCGTGCCGTTCATCGTCGAGCTGCGCAACGTGCCGTTCCGGCAGCAGGAGCA 15386 | | ||| |||||| | ||||| |||||||||||||| ||| ||| ||| || Sbjct 737 GCGCAGGCGCACACCGTTCGTAGTCGAACTGCGCAACGTGCCATTCAAGCAACAGCGTCA 678 Query 15387 GATCGCCTTCTACCTGCTTGATCGGCTCCCGCGCTTCACGGGCGGCGCCTTCGACGCGCG 15446 |||| |||||| | | || || | ||| |||| || || |||||| | Sbjct 677 GATCAAGTTCTACATCATCGACCGCTTACCGAACTTCCGTAAAGGTGCAGACGACGCTAG 618 Query 15447 GGGCAACGGCCAATACCTC---GCAGAAGTCGCGATGCAGCGCTACGG-CGCATCGCGCA 15502 |||||||||| | ||| | |||| ||| || || ||||| || | |||| Sbjct 617 GGGCAACGGCTCCCAGCTCTCGGAAGAAACCGCCATTGAG---TACGGTTTCAAC-CGCA 562 Query 15503 TCCAGCAAGTGATGCTGTCCGAGTCGTGGTATCGCGAGCACATGCCGCCCGTGAAGGCGG 15562 | | | || ||||| ||||| |||||||| || ||||||| || | || |||| Sbjct 561 TTGAACGGGTAATGCTTACCGAGGGATGGTATCGAGACAACATGCCCGCCTTTAAAGCGG 502 Query 15563 CGTTCGAAGACGGCACGATCGACGGCCTCCCGAAGGATGCCGACGTGCTCGCGGACCTGC 15622 | | ||||||| || || ||| | ||||| || |||||| || || | | Sbjct 501 CCCTGGAAGACGACAGCTTCTACGACATCCCGGCCGACAAAGACGTGGTCAGCGATGTAC 442 Query 15623 GCGCCGTACAGGTCATCAAGGGCGTGCCGCGCATCCCGGA 15662 ||||| | | | ||||||||||| | ||||||||||| Sbjct 441 GCGCCTTTCGCATGGTCAAGGGCGTGGCTCGCATCCCGGA 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117437857864500