Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18]
24,475 sequences; 185,827,756 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq22501 125 1e-24
seq12 114 3e-21
seq229 111 3e-20
seq17902 109 1e-19
seq11565 104 5e-18
seq19261 98.7 2e-16
seq4162 96.9 7e-16
seq17422 95.1 2e-15
seq6068 95.1 2e-15
seq158 95.1 2e-15
seq16583 93.3 8e-15
seq11456 93.3 8e-15
seq4133 89.7 1e-13
seq12996 87.8 4e-13
seq17974 84.2 4e-12
seq17636 84.2 4e-12
seq16727 82.4 1e-11
seq262 82.4 1e-11
seq20969 80.6 5e-11
seq188 80.6 5e-11
>seq22501
Length=287438
Score = 125 bits (138), Expect = 1e-24
Identities = 582/906 (64%), Gaps = 36/906 (4%)
Strand=Plus/Minus
Query 3847 TCCGATGACGATTATGCTTTTGCTCAAGTAGTCTGGAACGAGTTTAAAATCAATACGCTT 3906
|| ||||| |||||| ||||| || ||||||||| ||||||||| || ||| |
Sbjct 262134 TCAGATGAGGATTATCAGTTTGCCCAGAAAGTCTGGAATTTGTTTAAAATTAAAACGTTA 262075
Query 3907 GGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTTTGAA 3966
||||| || || || || || | || || ||| | | || || |||| || || |||
Sbjct 262074 GGAGATTATTCAGATTTGTATCTCAAAACAGATATTTTGCTTTTAGCTGACGTTTTCGAA 262015
Query 3967 AACTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATACAGCA 4026
|| ||| | | | |||| ||| | ||| || | || | |||| || |||||||
Sbjct 262014 AATTTTCGGGGAACGTGTTACAATATATATAAGCTTGATCCTGCGCACTATTTTACAGCA 261955
Query 4027 CCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGTTAACT 4086
||||| || || || ||| ||| | ||| |||| |||| || ||||| |||| ||
Sbjct 261954 CCAGGGCTATCTTTCGATGCTATGATGAAGTATACGAAAGTTAAAATTGAATTGTTGACG 261895
Query 4087 GATCCTGAGATGCTTCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGTATCGATGTGTGCT 4146
||| || |||||| | || |||||| || |||| ||||| || |||| |
Sbjct 261894 GATGTAGACATGCTTTTGTTTGTTGAAAGAGGAATTCGAGGTGGTATAAGTCAGTGTAGT 261835
Query 4147 AATAGACATGCTGAAGCTAACAACCGGTATATGGGCAAAGATTTTGATTCAAACAACCCC 4206
|| || | | |||| || || |||||||| | || | |||||| |||
Sbjct 261834 AAGCGATACTCAAAAGCGAATAATAAGTATATGG---ACGAGTATGATTC---CAAGTTA 261781
Query 4207 GA---AACATACCTGATGTACTATGATGTAAATAATTTGTATGGCGCAGCGATGAGTATG 4263
|| || || |||| || | |||| |||||||| ||||| |||||| |
Sbjct 261780 GAGACAAAATTTTTGATCTATTTAGATGCTAATAATTTATATGGATACTCGATGATGCAG 261721
Query 4264 TCTTTACCAAAGGGTAAATTTGAATGGGTTGAAAATGTAGA--TGA-TGTAGATCAGTTT 4320
| |||||| | | || || ||| || ||| ||| | | ||| || || ||
Sbjct 261720 TTTTTACCTTTATGCGATTTCGAGTGG--TGTCAAT-CAGAATTCAGTGTTGAAAAGATT 261664
Query 4321 TT--CAAT----GATG-ATGAGAGTGTAGGCTACATCCTTGAAGTAGATCTACACTATCC 4373
| | || |||| || | | ||| || || |||| || ||| || | |||||
Sbjct 261663 ATGACCATCTCAGATGAATCACCG-ACAGGATATATTTTTGAGGTGGATTTAGATTATCC 261605
Query 4374 TGAGAATTTACATGATCTACACAAAGATCTACCTTTATGCCCAGAACATT---TTGTACC 4430
|| |||||||||| |||||| ||| || |||||| | | ||| ||||
Sbjct 261604 ACAGTATTTACATGACAAACACAAGGATTATCCATTATGCGCCCATAATTGCATTGT--- 261548
Query 4431 ACCTGGTAGCAAG---CAACAAAAACTCACGACAACTCTGTACGATAAAAATAATTATGT 4487
|| || | ||| | | |||||| || || | |||||| || ||||||||
Sbjct 261547 TCCCGGAACAAAGAACGATCGAAAACTTCTTCTTACACTTTCCGATAAGAAAAATTATGT 261488
Query 4488 TATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAGTTCTT-AAGAAAATAC 4546
||||| || | || || ||| | | || ||| || | |||| || |||||
Sbjct 261487 CATTCATTACAGAATGTTAAAATTCGTTCTCGAGCAAGGATT-GATCTTGAAAAAAATTA 261429
Query 4547 ACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCG 4606
| | ||| || | || ||||||||| ||||| || ||||| | ||| |||||
Sbjct 261428 ATCGAGTGTTAGAGTTCAAGCAATCAGCGTGGCTAAAGCCATATGTAGATTTGAATACAA 261369
Query 4607 CATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATG 4666
| | | | ||| || ||||| |||||||||||||||| ||| | || |||
Sbjct 261368 ACTTAAGGACAGCAGCGAAAAATGATTTCGAAAAAAACTTTTTCAAACTTTTGGTAAATT 261309
Query 4667 CGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATA-AAGATATATATTTAAGAACA 4725
|| ||| ||| || || ||||| ||||| | | || | ||||||| |||| ||||
Sbjct 261308 CGATTTATGGGAAAACAATGGAAAATGTTAG-ATCTAGAGTAGATATAAGCTTAAAAACA 261250
Query 4726 AAGTGG 4731
|| |||
Sbjct 261249 AAATGG 261244
Score = 95.1 bits (104), Expect = 2e-15
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 7925 GGTAAAGGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGT 7984
||||||||||| |||| || |||||| | || || ||| ||||| | || || ||
Sbjct 256220 GGTAAAGGTTTAATCAATAAAATAATCGATAAACTTCCATTTGAAATGCATATTCCGAAA 256279
Query 7985 TATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGT 8044
|| ||||| ||||| || |||||||| ||| |||| || | || ||||| ||| | ||
Sbjct 256280 TACCAGTATTGCGGACCTGGTACAAAATTATCCAAACGACTCGCCCGAGGAGATCCTGGC 256339
Query 8045 ATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTAC 8089
|| ||||| | || || || || || || || || ||||| |||
Sbjct 256340 ATTAATCCGCTCGATGCAGCATGCAAAGAGCATGACATAGCGTAC 256384
>seq12
Length=514263
Score = 114 bits (126), Expect = 3e-21
Identities = 562/874 (64%), Gaps = 34/874 (4%)
Strand=Plus/Minus
Query 3844 ATTTCCGATGACGATTATGCTTTTGC-TCAAGTAGTCTGGAACGAGTTTAAAATCAATAC 3902
|| |||||||| ||||| | |||||| | || || ||| | || || |||| || ||
Sbjct 512283 ATATCCGATGAAGATTACGATTTTGCATGTCGT-GTATGGGATGAATTCGAAATAAAAAC 512225
Query 3903 GCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTT 3962
|| || |||| || ||| |||| || ||||| ||| | | | |||| ||| |||||
Sbjct 512224 ACTAGGTCAGTATTCTGACCTATATTTGAAGACAGATATTTTGTTGTTGAGTGACGTCTT 512165
Query 3963 TGAAAACTTTAGACGTAGTTGTT-TCAAGACATACAATTTAGACGCACTACACTTTTATA 4021
||| || || || | ||||| | | | || ||| | ||||| || | || |
Sbjct 512164 TGAGAATTTCCGAGAAACTTGTTATGCTGTC-TATAATCTCGACGCTGCGCATTATTTCA 512106
Query 4022 CAGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGT 4081
||||||| ||| | || | || ||| ||||| ||||| |||| ||| | ||||| |
Sbjct 512105 CAGCACCGGGTTTGTCATTTGACGCGATGCTAAAGTATACTCAAGTTGAAATCGAACTCT 512046
Query 4082 TAACTGATCCTGAGATGCTTCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGTATCGATGT 4141
||||||| ||| ||||| | || |||||| || ||||||| || || ||
Sbjct 512045 TAACTGACATTGATATGCTGTTATTTGTTGAAAGAGGCATTCGCGGAGGCATAAGCCAGT 511986
Query 4142 GTGCTAATAGACATGCTGAAGCTAACAACCGGTATATGGGCAAAGATTTTGATTCAAACA 4201
|| || | ||| | |||| ||||| || | |||| || |||| |||| || |
Sbjct 511985 GTAGCAAGCGTCATTCAAAAGCCAACAATCGATTTATG---AATGATTATGATATGAATA 511929
Query 4202 ACCCCGAAACATACCTGATG---TACTATGATGTAAATAATTTGTATGGCGCAGCGATGA 4258
| ||||| | | | |||| || | ||||| | || || ||||||
Sbjct 511928 ---CTGAAACCAAGTTTTTAGTATACTTGGACGCGAATAACCTTTACGGTTATTCGATGA 511872
Query 4259 GTATGTCTTTACCAAAGGGTAAATTTGAATGGGTT--GAAAATGTAGAT-GATGTAGATC 4315
| | |||||| || ||| ||||| | | |||||| | || | ||| |
Sbjct 511871 TGCAGCATCTACCAATAAACAACTTTAAATGGAATATGGAAATGTTTACCGAAG-AGACC 511813
Query 4316 AGTTTTTCAAT------GATGATGAGAGTGTAGGCTACATCCTTGAAGTAGATCTACACT 4369
| | || ||| ||||||| || || || ||||||| ||||| ||||
Sbjct 511812 A--TATTGAATTTGGCAGATGATGGACCCACTGGATATATTTTTGAAGTTGATCTTCACT 511755
Query 4370 ATCCTGAGAATTTACATGATCTACACAAAGATCTA-CCTTTATGCCCAGAACATT---TT 4425
||||| | | |||||||| ||| || ||| || ||||| | ||| || ||
Sbjct 511754 ATCCTCAAAGCCTACATGATAAACATGCTGA-CTATCCATTATGTGCCGAAAATAGAATT 511696
Query 4426 GTACCACCTGGTAGCAAGCAACAAAAACTCACGACAACTCTGTACGATAAAAATAATTAT 4485
|| ||| | | || || |||||||| | || || ||||| ||||| | ||
Sbjct 511695 GTTCCAGGTTCAAAGAATGAAAAAAAACTCTTGCTTACGCTTTACGACAAAAAAATATAC 511636
Query 4486 GTTATTCACTATAAAAATTTGAAACAATGTT-TAGATTTAGGTTTAGTTCTTAA-GAAAA 4543
|| ||||| | | ||||| ||| |||| | | |||| | | |||| |||||
Sbjct 511635 GTCATTCATT-TCAAAATGCTAAAATTTGTTCTTCAACAAGGTAT-GAAATTAATGAAAA 511578
Query 4544 TACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATA 4603
|||| ||| || | ||| || ||| ||| | ||| | ||||| ||| ||||
Sbjct 511577 TACATAGAGTTATGGAGTTTTCACAGTCAACATGGTTAAAACCTTATATTGATTTGAATA 511518
Query 4604 CCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATA 4663
| | | |||| | || || || || || |||||| |||||||||| ||| ||| |
Sbjct 511517 CGGATTTGCGAACAAAGGCAAATAACGACTTTGAAAAAGACTTTTATAAGTTATTGATAA 511458
Query 4664 ATGCGGTTTTTGGAAAGACGATGGAGAATGTACG 4697
|||| | | |||||| |||||||||||||| ||
Sbjct 511457 ATGCAATCTATGGAAAAACGATGGAGAATGTGCG 511424
>seq229
Length=564
Score = 111 bits (122), Expect = 3e-20
Identities = 199/291 (68%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 3843 CATTTCCGATGACGATTATGCTTTTGCTCAAGTAGTCTGGAACGAGTTTAAAATCAATAC 3902
|||||||||||| |||||||||||| || ||| |||| || || || || |||
Sbjct 412 CATTTCCGATGAGAATTATGCTTTTGTACAGCAAGTGTGGACAGAATTCAATATTGGTAC 353
Query 3903 GCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTT 3962
| || | ||| | ||| | ||||| ||||||||||| | | ||| ||||||| ||
Sbjct 352 TTTGGGGCAATACACTGACATGTACTTGAAGACTGATGTTTTATTTTTGGCTGATGTTTT 293
Query 3963 TGAAAACTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATAC 4022
|||||| || ||| | |||| | ||| || || | || | || | ||||||
Sbjct 292 TGAAAATTTCAGAGCAAACTGTTACGAGATCTATAAACTTGATCCTGCTCATTATTATAC 233
Query 4023 AGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGTT 4082
| |||| | ||| || || ||||||||| || |||| |||| || | ||| || |
Sbjct 232 ATCACCCGATCTATCATTCGATGCAATGTTGAAATATACAAAAGTTGAGATCGAATTGCT 173
Query 4083 AACTGATCCTGAGATGCTTCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGT 4133
|| || || ||| || | | ||||| ||||| ||||| ||||| ||
Sbjct 172 GACCGACGTCGATATGTTTATGCTGATTGAGAAGGGAGTTCGTGGTGGAGT 122
>seq17902
Length=3819
Score = 109 bits (120), Expect = 1e-19
Identities = 132/179 (74%), Gaps = 2/179 (1%)
Strand=Plus/Minus
Query 7918 CAGACGTGGTAAAGGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACAT 7977
|| || |||||| ||||| |||||| ||||||| | || || ||| || || | || ||
Sbjct 2027 CAAACATGGTAATGGTTTAATCAACAGTATAATCGATAAACTTCCATTTAAAATGCATAT 1968
Query 7978 ACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGA 8037
|| |||||||| ||||| || |||||||| ||| ||| || | ||| |||||||
Sbjct 1967 TCCGAAATATCAGTATTGCGGACCTGGTACAAACTTAAAAAAGCGACTCGCTAGAGGTGA 1908
Query 8038 TTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTAC--TCAAA 8094
| | ||||||||||| | || || || || || | |||||||| || ||| |||||
Sbjct 1907 TCCTGGTATAAATCCCCTCGATGCAGCTTGCAAACAGCACGATATCGCATACGATCAAA 1849
>seq11565
Length=107116
Score = 104 bits (114), Expect = 5e-18
Identities = 195/287 (68%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 3844 ATTTCCGATGACGATTATGCTTTTGCTCAAGTAGTCTGGAACGAGTTTAAAATCAATACG 3903
|| || ||||||||||| ||| |||| | ||||| | | || || || |||
Sbjct 4966 ATATCGGATGACGATTACCAATTTTCTCACGATATCTGGCAGAAATTCAATTGTAAAACG 4907
Query 3904 CTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTTT 3963
|| ||||| || || || | || ||||||| ||||| || || ||| | || || |||
Sbjct 4906 CTCGGAGACTATTCAGAACTGTATCTAAAGACAGATGTGCTACTGTTGGCCGACGTATTT 4847
Query 3964 GAAAACTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATACA 4023
||||| ||| || || || | | |||| ||| || | | ||| ||||||
Sbjct 4846 GAAAATTTTCGAAATACATGCCATATAATTTACAGTTTGGATCCGGCAAACTACTATACA 4787
Query 4024 GCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGTTA 4083
|| ||||||||||| | ||| ||| | || |||| | ||| || |||||||||||
Sbjct 4786 GCTCCAGGTCTTTCTTGGGATGCCATGCTCAAATATACCGGAGTGAAAATTGAACTGTTA 4727
Query 4084 ACTGATCCTGAGATGCTTCTTTTCATTGAAAAGGGTGTTCGCGGTGG 4130
||||| || ||| | || ||||| ||| || ||||||||||
Sbjct 4726 TCTGATGTAGAAATGTTGCTGTTCATCGAACGTGGAATTCGCGGTGG 4680
>seq19261
Length=27068
Score = 98.7 bits (108), Expect = 2e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 7921 ACGTGGTAAAGGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACC 7980
|||||| ||||| | || | || || || || || | || | ||| | || | ||
Sbjct 21095 ACGTGGCAAAGGAATTATCGATAAAATTATTAATAAATTGCCGTTCGAATTGCATGTGCC 21154
Query 7981 AGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTC 8040
| ||||||||||||||||| || ||||| | | || | ||||| ||||||||| |
Sbjct 21155 AAACTATCAGTACTGCGGTCCAGGAACAAAACTGGGTAAACGTTTAGCGCGAGGTGATCC 21214
Query 8041 AGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATC 8099
||| |||||||||||||| | ||| || || |||||||||| || || || || |||
Sbjct 21215 AGGCATAAATCCTTTGGATGTTGCCTGCAAACAACACGATATTGCATATACAGAACATC 21273
Score = 84.2 bits (92), Expect = 4e-12
Identities = 111/154 (72%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 5308 TAAACTCTCGCCACATTTTCGTCTTAAGTGTTCTATTGAAACGTTCACATATGGATGCTT 5367
||||| |||||||||||| | ||||| || | ||||||||| ||| ||| || ||||
Sbjct 25803 TAAACAGTCGCCACATTTTATTTTTAAGAGTACGATTGAAACGCTCAACTATTGACGCTT 25744
Query 5368 TGAGATTGCTGAATGTTGAATACAGATTTATCTTGTGCTGCTTCATCAGATCTTTGAATT 5427
| | ||||||| |||||||||| ||| || || || || | || || ||| |
Sbjct 25743 TCATGATGCTGAACGTTGAATACAAATTAATTTTCTGTTGGCGAAGCATATTTTTCATCG 25684
Query 5428 CTTTGTTGTAAAACTCTTTACCCTGATCAACATG 5461
|| ||||| || ||||| |||| ||||| ||
Sbjct 25683 GTTCATTGTAGAATTCTTTGCCCTTGTCAACGTG 25650
>seq4162
Length=987
Score = 96.9 bits (106), Expect = 7e-16
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 3843 CATTTCCGATGACGATTATGCTTTTGCTCAAGTAGTCTGGAACGAGTTTAAAATCAATAC 3902
|||| ||||| | ||||||||||||| || ||| |||| || || || || |||
Sbjct 712 CATTCCCGATAAGGATTATGCTTTTGTGCAGCAAGTGTGGACAGAATTCAATATTGGTAC 771
Query 3903 GCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTT 3962
| ||| | ||| | || || ||| | ||||| ||||| || || ||| ||||||| ||
Sbjct 772 ATTGGGACAATACACTGATTTGTACCTGAAGACCGATGTTCTGCTTTTGGCTGATGTTTT 831
Query 3963 TGAAAACTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATAC 4022
|||||| || | | ||||| | | | ||| | | || ||| ||| | ||| ||
Sbjct 832 TGAAAATTTCCGTGCAAATTGTTACGATATCTACGAACTTGATGCAGCACATTATTACAC 891
Query 4023 AGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGA 4070
| |||||||||| || || |||||||| || |||| |||| ||
Sbjct 892 ATCACCAGGTCTGTCATTCGACGCAATGTTGAAATATACCAAAGTCGA 939
>seq17422
Length=5122
Score = 95.1 bits (104), Expect = 2e-15
Identities = 239/350 (68%), Gaps = 25/350 (7%)
Strand=Plus/Minus
Query 3901 ACGCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTC 3960
||||||||||| ||||| || ||||| || || || ||||| || | | |||||||
Sbjct 1324 ACGCTTGGAGAATACTCTGATTTATATTTGAAAACGGATGTGCTATTACTAGCTGATGTG 1265
Query 3961 TTTGAAAACTTTAGACGTAGTTG--TTTCAAGACATACAATTTAGACGCACTACACTTTT 4018
||||| ||||||||| || || || | | |||| || || ||| | ||||| ||
Sbjct 1264 TTTGAGAACTTTAGAAATACATGCATTGCTACACATTCACTT--GACCCTGCACACTATT 1207
Query 4019 ATACAGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAAC 4078
| ||||| || || ||| || ||||||||| || | |||| || | ||||
Sbjct 1206 TTGGTGCACCCGGACTCTCGTTCGATGCAATGTTGAAATACACTGGTGTCTCTATAGAAC 1147
Query 4079 TGTTAACTGATCCTGAGATGCT--TCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGTATC 4136
| || |||||| || ||||| | ||| || ||||| || | || ||||| ||
Sbjct 1146 TTTTCACTGATGTGGATATGCTGATGTTTGCA--GAAAATGGAATACGTGGTGGTGT--- 1092
Query 4137 GATGTGTGCT-AATA---GACATGCTGA-AGCTAACAACCGGTATATGGGCAAAGATTTT 4191
|| || | | |||| || ||| ||| ||| ||||| || ||||||||||| |||
Sbjct 1091 GA-GTCAGATAAATAAGCGATATG-TGAGAGCAAACAATAAATACATGGGCAAAGAGTTT 1034
Query 4192 GA---TTCAAACAACCCCGAAACATACCTGATGTACTATGAT-GTAAATA 4237
|| |||||| || | |||| ||| |||||| ||| |||||||
Sbjct 1033 GAACCTTCAAAGAAAAC---TTCATATCTGCTGTACTTGGATGGTAAATA 987
>seq6068
Length=171351
Score = 95.1 bits (104), Expect = 2e-15
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 7985 TATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGT 8044
|||||||| || || ||||||||||| || | || | ||||| ||||||||| ||||
Sbjct 3862 TATCAGTATTGTGGACCGGGTACAAAATTGGATAAACGTTTAGCACGAGGTGATCCAGGC 3803
Query 8045 ATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTAC 8089
|||||||| ||||| | |||||| || |||||||||| || |||
Sbjct 3802 ATAAATCCATTGGATGTTGCGTGCAAACAACACGATATTGCATAC 3758
>seq158
Length=237488
Score = 95.1 bits (104), Expect = 2e-15
Identities = 121/164 (74%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 5308 TAAACTCTCGCCACATTTTCGTCTTAAGTGTTCTATTGAAACGTTCACATATGGATGCTT 5367
||||| || ||||||||| ||||||| || | ||| ||||||||| ||| | ||||
Sbjct 96334 TAAACAGTCTCCACATTTTATTCTTAAGAGTACGATTAAAACGTTCAACTATTGCCGCTT 96275
Query 5368 TGAGATTGCTGAATGTTGAATACAGATTTATCTTGTGCTGCTTCATCAGATCTTTGAATT 5427
| | |||||||||||||||||| |||||| || || || | | || || ||| |
Sbjct 96274 TCATTATGCTGAATGTTGAATACAAATTTATTTTTTGTTGATGGAGCATATTTTTCATCG 96215
Query 5428 CTTTGTTGTAAAACTCTTTACC-CTGATCAACATGGAGATTCTT 5470
|| ||||| || ||||| || ||| |||||||| | ||| ||
Sbjct 96214 GTTCATTGTAGAATTCTTTGCCTCTG-TCAACATGAATATTTTT 96172
Score = 93.3 bits (102), Expect = 8e-15
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 7961 CCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAG 8020
||| | ||| | || ||||| ||||| | |||||| || || ||||| || | ||
Sbjct 91579 CCATTCGAAATGCATATACCGAAATATCAATTCTGCGGACCAGGCACAAAATTGGAAAAA 91638
Query 8021 AGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGAT 8080
| ||||| ||||||||| |||| |||||||| ||||| || || ||||| |||||||||
Sbjct 91639 CGTTTAGCACGAGGTGATGCAGGCATAAATCCATTGGATGCAGCCTGTAAAGAACACGAT 91698
Query 8081 ATAGCTTACTCAAA 8094
|| || || ||||
Sbjct 91699 ATTGCATATACAAA 91712
>seq16583
Length=77764
Score = 93.3 bits (102), Expect = 8e-15
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 3372 AGTTTATGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAA 3431
|||| |||||||||||| | | | || || | |||| || ||| |||| || ||
Sbjct 46465 AGTTCGTGATCATTGTCATTATTCAGGAAAATTTAGAGGTGTTGCGCATAGTGTTTGCAA 46406
Query 3432 CGTTAATTATCAAAAATCTACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGA 3491
|| |||| |||| | | || || || ||||| | ||||||||||| ||||||||
Sbjct 46405 TGTAAATTTTCAAGAGAGTCGAATCATTCCGGTTGTGATGCATAATTTATCTGGCTATGA 46346
Query 3492 TTCCCACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACC 3551
| |||| || |||| || | || || | | | | ||||| || || || | ||
Sbjct 46345 TGCCCATTTATTAATAAAAAAACTGGCAACTGAAATAAAGGGTGATATGTCGATAATTCC 46286
Query 3552 GATCAATAAAGAACGTTACATTTCTTTCACAAAA 3585
|||||||| |||| |||||||| |||||||||
Sbjct 46285 GATCAATAGTGAACAATACATTTCATTCACAAAA 46252
>seq11456
Length=75192
Score = 93.3 bits (102), Expect = 8e-15
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 7985 TATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGT 8044
||||||||||||||||| |||||||| | | ||| | ||| ||||||||| ||||
Sbjct 26811 TATCAGTACTGCGGTCCAGGTACAAAACTGGACAAACGTTTAAAGCGAGGTGATCCAGGC 26870
Query 8045 ATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTA 8088
|||||||||||||| | ||| || || |||||||||| || ||
Sbjct 26871 ATAAATCCTTTGGATGTTGCCTGCAAACAACACGATATTGCATA 26914
Score = 93.3 bits (102), Expect = 8e-15
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 7985 TATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGT 8044
||||||||||||||||| |||||||| | | ||| | ||| ||||||||| ||||
Sbjct 29140 TATCAGTACTGCGGTCCAGGTACAAAACTGGACAAACGTTTAAAGCGAGGTGATCCAGGC 29199
Query 8045 ATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTA 8088
|||||||||||||| | ||| || || |||||||||| || ||
Sbjct 29200 ATAAATCCTTTGGATGTTGCCTGCAAACAACACGATATTGCATA 29243
>seq4133
Length=1472
Score = 89.7 bits (98), Expect = 1e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 7921 ACGTGGTAAAGGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACC 7980
|| ||| ||||| | || | || || ||| | || | || ||||| | || | ||
Sbjct 1270 ACATGGCAAAGGAATTATCGATAAAATTATCGATAAATTGCCGTTTGAATTGCATGTGCC 1329
Query 7981 AGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTC 8040
| ||||||||||| || ||||||||||| || | || | ||||| ||||||||| |
Sbjct 1330 AAAATATCAGTACTGTGGACCGGGTACAAAATTGGATAAACGTTTAGCACGAGGTGATCC 1389
Query 8041 AGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTAC 8089
|| |||||||| ||||| | ||| || || ||||||| || || |||
Sbjct 1390 GGGCATAAATCCATTGGATGTTGCTTGCAAACAACACGACATTGCATAC 1438
>seq12996
Length=108466
Score = 87.8 bits (96), Expect = 4e-13
Identities = 270/415 (65%), Gaps = 2/415 (0%)
Strand=Plus/Minus
Query 7298 AAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTC 7357
||||||| || | |||||| |||||||| ||| ||||| | | |||||||||||| |
Sbjct 91531 AAATATGTTTTAAATTCATATCATCTTGTTTGAAAAGCACTAAGACGTTTGCATTATCGC 91472
Query 7358 TAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCT 7417
|| | || || | || ||| ||| |||||| |||||| || | ||||| || |
Sbjct 91471 GTATTAAATGTTTTTGAATGTGTGAGTAACTTTGACTGAGATAAAAACAGTCAATCTCTT 91412
Query 7418 TGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGT 7477
| |||| |||||| || || | | | ||| | | |||||| |||| || || |
Sbjct 91411 TATGTCTACCCATACAAAAGTATGATCTGAAATTGTTTTGTTTTCCACATATTACGTCAT 91352
Query 7478 CAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGCTTGATTACAGCTTCA-TGTTCG 7536
| || || | | || || || || | || || | || || | ||| || |||
Sbjct 91351 CGAAGATGAATATTGAATTTGGTTTGACTTCATCGAGAGAAATGACTGACTCATTGCTCG 91292
Query 7537 CTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTCTCCAGGAACTGATAC 7596
|| | || |||| || | ||| | | | ||| || || | |||
Sbjct 91291 AAAAAAGATAA-CATCCGATTTCTGGAATTTTATCCAATAGTTGCTTCAAATAGACATAT 91233
Query 7597 TTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAACCTCAAACCGTTTGGA 7656
|||||||| | ||||||||||| |||| || | || ||||| | || || |||||
Sbjct 91232 TTTGGTTGATACAGAGACTTTGAATAAATGTAAACGTTTTCAAAGCGTAATCCATTTGGG 91173
Query 7657 TGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGATGGCCCGCAAA 7711
| |||| | | | | |||| ||||||||||| ||||||||||| ||||
Sbjct 91172 TTCTCAATCAAACTAATGATCACATTTGTCTTTCCACAATTTGATGGCCCACAAA 91118
>seq17974
Length=59888
Score = 84.2 bits (92), Expect = 4e-12
Identities = 163/237 (69%), Gaps = 8/237 (3%)
Strand=Plus/Plus
Query 3901 ACGCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTC 3960
||||||||||| ||||| || ||||| ||||| || ||||| | | || |||||||
Sbjct 5183 ACGCTTGGAGAATACTCTGATTTATATTTAAAAACAGATGTGTTATTACTGGCTGATGTG 5242
Query 3961 TTTGAAAACTTTAGACGTAGTTG--TTTCAAGACATACAATTTAGACGCACTACACTTTT 4018
||||| ||||||||| | || || | | |||| || || ||| | ||||| ||
Sbjct 5243 TTTGAGAACTTTAGAAATTCATGCATTGCTACACATTCACTT--GACCCTGCACACTATT 5300
Query 4019 ATACAGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAAC 4078
| |||| ||||| ||| || ||||||||| || | |||| || | ||||
Sbjct 5301 TTGGTACACCCGGTCTATCGTTCGATGCAATGTTGAAATACACTGGTGTCTCTATCGAAC 5360
Query 4079 TGTTAACTGATCCTGAGATGCT--TCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGT 4133
| || |||||| || ||||| | ||| || ||||| || | || ||||| ||
Sbjct 5361 TTTTCACTGATGTGGATATGCTGATGTTTGCA--GAAAATGGAATACGTGGTGGTGT 5415
>seq17636
Length=76950
Score = 84.2 bits (92), Expect = 4e-12
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 7966 TGAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATT 8025
|||| | ||||| || ||||||||||| || || || ||||| || ||||| || | |
Sbjct 76683 TGAAATCCACATTCCTGGTTATCAGTATTGTGGACCAGGTACTAATTTAGCTAAACGTGT 76742
Query 8026 AGCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGC 8085
||| || |||||| |||||||||| || || ||||| ||||| || || ||| | ||
Sbjct 76743 AGCGCGCGGTGATCAAGGTATAAATAAATTAGATGCTGCATGTAAAGAGCATGATTTCGC 76802
Query 8086 TTAC 8089
|||
Sbjct 76803 ATAC 76806
>seq16727
Length=3036
Score = 82.4 bits (90), Expect = 1e-11
Identities = 195/291 (67%), Gaps = 8/291 (3%)
Strand=Plus/Plus
Query 3844 ATTTCCGATGACGATTATGCTTTTGC--TCAAGTAGTCTGGAACGAGTTTAAAATCAATA 3901
||||| ||||| || |||| ||| || | || | | ||| | ||||| | || |
Sbjct 2303 ATTTCAGATGATGAGTATGTTTTCGCCTTGAA--AATATGGGATACATTTAATCTAAAAA 2360
Query 3902 CGCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCT 3961
| || || || ||| | || |||| |||||||||||||| || || ||| ||||||| |
Sbjct 2361 CTCTGGGTGAATACACTGATCTATATTTAAAGACTGATGTACTACTGTTGGCTGATGTTT 2420
Query 3962 TTGAAAACTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATA 4021
| || || ||| || || |||| ||| || || | ||| || ||| | || ||
Sbjct 2421 TCGAGAATTTTCGAGATACTTGTCAGCAGATTTATAAGCTCGACCCAGCACATTATTTTA 2480
Query 4022 CAGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAG--TAGAACTTGAACT 4079
|| |||||||| || | ||| ||| || ||| ||| || || | || ||
Sbjct 2481 CATGTCCAGGTCTGTCATGGGATGCCATGCTACTCTTTAC--AAGGATAAAAATCGAGCT 2538
Query 4080 GTTAACTGATCCTGAGATGCTTCTTTTCATTGAAAAGGGTGTTCGCGGTGG 4130
| | |||||| || ||| | || ||| ||||| |||| | ||||||||
Sbjct 2539 GCTTACTGATATCGATATGTTACTATTCGTTGAACGGGGTATCCGCGGTGG 2589
>seq262
Length=293590
Score = 82.4 bits (90), Expect = 1e-11
Identities = 240/355 (68%), Gaps = 35/355 (10%)
Strand=Plus/Minus
Query 3901 ACGCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTC 3960
||||||||||| ||||| || |||||||| || || ||||| || | || | |||||
Sbjct 290354 ACGCTTGGAGAATACTCTGATTTATACTTGAAAACGGATGTGTTTTTACTGGCGGATGTA 290295
Query 3961 TTTGAAAACTTTAGACGTAGTTG--TTTCAAGACATACAATTTAGACGCACTACACTTTT 4018
||||| || |||||| | || || | | |||| || || ||| | ||||| ||
Sbjct 290294 TTTGAGAATTTTAGAAACACATGCATTGCTACACATTCACTT--GACCCTGCACACTATT 290237
Query 4019 ATACAGCACCAGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAAC--TTGA 4076
| ||||| ||||| ||| || ||||||||| || | |||| ||| | | ||
Sbjct 290236 TTGGTGCACCCGGTCTCTCGTTCGATGCAATGTTGAAATACACTG--GTACTTCTATCGA 290179
Query 4077 ACTGTTAACTGATCCTGAGATGCT--TCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGTA 4134
||| || ||||| || ||||| | ||| || ||||| || | || ||||| ||
Sbjct 290178 ACTTTTCACTGACGTGGATATGCTGATGTTTGCA--GAAAATGGAATACGTGGTGGTGT- 290122
Query 4135 TCGATGTGTGCT-AATA---GACATGCTGA-AGCTAACAACCGGTATATGGGCAAAGATT 4189
|| || | | |||| || ||| ||| ||| ||||| || |||| ||| || |
Sbjct 290121 --GA-GTCAGATAAATAAGCGATATG-TGAGAGCAAACAATAAATACATGGACAATGAGT 290066
Query 4190 TTGA---TTCAAACAACCCCGAAA---CATACCTGATGTACTATGAT-GTAAATA 4237
|||| |||||| |||| |||||||| |||||| ||| |||||||
Sbjct 290065 TTGAATCTTCAAA------GGAAACTTCATACCTGCTGTACTTGGATGGTAAATA 290017
>seq20969
Length=509247
Score = 80.6 bits (88), Expect = 5e-11
Identities = 113/157 (72%), Gaps = 4/157 (3%)
Strand=Plus/Plus
Query 3901 ACGCTTGGAGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTC 3960
|| |||||||| ||||| || |||||||| || || ||||| | | || |||||||
Sbjct 73094 ACACTTGGAGAATACTCTGATTTATACTTGAAAACGGATGTGTTATTACTGGCTGATGTA 73153
Query 3961 TTTGAAAACTTTAGACGTAGTTGTTT--CAAGACATACAATTTAGACGCACTACACTTTT 4018
||||| |||||| || || ||| | | | |||| || || ||| | ||||| ||
Sbjct 73154 TTTGAGAACTTTCGAAATACATGTATTGCTACACATTCACTT--GACCCTGCACACTATT 73211
Query 4019 ATACAGCACCAGGTCTTTCGAACGCTGCAATGTTAAA 4055
||| ||||||||||| || | ||||||||| ||
Sbjct 73212 TTACTGCACCAGGTCTCTCATTTGATGCAATGTTGAA 73248
>seq188
Length=1931073
Score = 80.6 bits (88), Expect = 5e-11
Identities = 116/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 4529 TAGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCAT 4588
|| || | || ||| |||| | ||| | | || | ||||||| |||| | ||| |||
Sbjct 691346 TAATTTTGAAAAAAGTACATCGAGTTGTCCAGTTCAACCAATCAGCCTGGTTAAAACCAT 691405
Query 4589 ATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTT 4648
|||||||| ||| |||| || | ||| | |||||| || ||||| || || |
Sbjct 691406 ATATCGATCTAAACACCGATCTACGTTCAAAAGCAACGAATGAATTTGAAAAGAATTTAT 691465
Query 4649 ATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAAT 4692
||||||| ||| |||||| ||| |||||| || ||||| |||
Sbjct 691466 ATAAATTGATGTGCAATGCGATTTATGGAAAAACTATGGAAAAT 691509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97945924659150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |